Cynara cardunculus var. scolymus (artichoke): 112515779
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Entry
112515779 CDS
T05604
Name
(RefSeq) ribosomal RNA small subunit methyltransferase, mitochondrial
KO
K14191
18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:
2.1.1.183
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccav03009
]
112515779
Enzymes [BR:
ccav01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.183 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase
112515779
Ribosome biogenesis [BR:
ccav03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
112515779
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RrnaAD
Methyltransf_25
Methyltransf_11
Methyltransf_12
Methyltransf_31
Ubie_methyltran
PrmA
UPF0020
MTS
Methyltransf_4
CMAS
GidB
Methyltransf_23
PCMT
Methyltransf_18
DREV
TRM5-TYW2_MTfase
BpsA_C
tRNA_U5-meth_tr
Cons_hypoth95
Spermine_synth
Motif
Other DBs
NCBI-GeneID:
112515779
NCBI-ProteinID:
XP_024978473
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All DBs
Position
LG 7:complement(6944058..6945663)
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AA seq
380 aa
AA seq
DB search
MLQCPKSSVNRLSVHHLLQLSAQFHQVRAKSGRPPFKNRYDNKDDNGDGYTRKRNENQED
RLQLYKSRGQHLLTNPRILDSIVRSSGVGPGETVLEIGPGTGNLTLKLLEVAKKVIAVEV
DKRMVEVLNKRVSERGFGDKLTIICEDALKTDFPDFDLVVANIPYGISSPLIAKLVFGGY
QFRNATLLLQKEFANRLLANPGDSEFNRLAVNVKLVAEIDHIMNVSKRDFVPIPKVDSSV
VKIRLRSEVPNLDLNEWWAFTKTCFGKKNKTLGATFRQKKKVAELLNLSKLTSLDENIEK
HDSCNRSDDEEDEWEDSGTGVKSFKEKVVGILRNAGLEDKRPSKLSNEELMHLLSLFNEA
GICFHDESRPVDINASFAAS
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaatgtcccaaatcctccgtcaatcgtctttcggttcaccatcttctccaactc
tctgcccaatttcaccaggttcgcgcgaaatcgggtcgtccgccattcaagaacagatat
gacaacaaggacgacaatggtgatggttatactcgaaagagaaatgagaatcaagaggat
cgtttacagctatacaaaagcaggggccaacatcttttaactaacccaagaatccttgat
tccattgttaggagttccggtgttgggcctggcgaaacggttcttgaaatcggacctggc
accggaaatcttaccctgaagcttcttgaagttgctaaaaaggttattgcagtggaagtt
gataagcgtatggtggaggtccttaacaaacgtgtttctgaacgtggatttggcgataaa
ttgacgattatatgtgaagatgcactaaagacagattttccagattttgatcttgtagta
gcaaatatcccttatgggatatcatcgcctttgatagctaaattggtatttgggggatac
cagtttcgaaatgcgactcttctccttcaaaaagagtttgctaatcgactcttggcgaat
cccggtgactcagagttcaatcggttggcagtcaacgtgaaactggttgctgagattgat
catatcatgaacgtaagcaaaagggatttcgtgccaattcctaaagtcgattcatcagtt
gttaaaatccgtttgagatctgaagttccaaatctagatcttaacgaatggtgggcgttc
actaaaacgtgttttgggaagaaaaacaagacgctgggtgccacgtttaggcagaagaag
aaggtggcagagctgctaaatttgtcgaagttaacaagtcttgatgaaaatattgaaaaa
cacgattcttgtaatcgaagcgacgatgaggaagatgaatgggaggattcaggaacaggg
gtgaagtcgtttaaggaaaaagttgtcgggattcttagaaatgccgggctcgaggataag
agaccatcaaaattatcgaatgaggagttgatgcatttgctatcgttatttaatgaagcg
ggaatatgtttccatgacgaatcaaggcccgtagatatcaatgcttcatttgctgcatca
tag
DBGET
integrated database retrieval system
