Cynara cardunculus var. scolymus (artichoke): 112515798
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Entry
112515798 CDS
T05604
Name
(RefSeq) RING-H2 finger protein ATL78-like
KO
K19040
E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:
2.3.2.27
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccav04121
]
112515798
Enzymes [BR:
ccav01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112515798
Ubiquitin system [BR:
ccav04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
112515798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
zf-RING_16
FANCL_C
zf-RING-like
zf_RING_Vps8_fungal
zinc_ribbon_16
zf-RING_4
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
112515798
NCBI-ProteinID:
XP_024978497
LinkDB
All DBs
Position
LG 7:complement(10317467..10318327)
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AA seq
231 aa
AA seq
DB search
MSTXFIVLFQGNLGHFQSRKLLLHAPMYQHIATTVRTGVEETAASPTPSRVTGNKSFDAN
VVMVLSVLLCALICSLGLNFVIRCVLRCSSMVHSESITDLENTPTKSANIGLNKKALKTF
PTVRYWKGLTLPGLDKECVICLSEFVPEELVKILPKCNHGFHARCIDKWLSSHSSCPTCR
HSLVETCQKILSGGVCGTATLPQLQGQESQSISTVVIMPLQPEHPIRSYEM
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactartttcatcgtactctttcaaggcaatttgggycattttcaatcaagaaag
cttctacttcatgctcctatgtaccaacacatagcaacgacggtgcgcacaggagtcgag
gagacagcagcatcaccaacaccgagtcgagtcactggaaataaaagctttgatgcgaat
gtggtgatggttttgtcggttcttctgtgtgctctcatttgttccttaggattgaacttt
gtcatcaggtgtgtcttaaggtgctcaagtatggttcactctgagtctatcactgactta
gaaaacacaccaaccaagtcagccaacattggacttaacaaaaaggcgttaaaaactttc
ccaactgtccgctattggaaaggacttacgttacctggattggacaaggaatgcgtgata
tgcttaagtgagtttgtccctgaagaacttgtcaaaatactaccaaaatgcaatcatggg
ttccatgctcgatgcatcgacaagtggttgagttcacactcctcttgccctacttgtcga
cactccctcgtagaaacgtgtcagaagattttgtcaggtggggtgtgtggtaccgcaaca
ctaccacaacttcaaggacaagagtcacaaagtatcagtaccgtagttattatgcctttg
caaccggagcatcctattcgaagctatgagatgtag
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