Cynara cardunculus var. scolymus (artichoke): 112515825
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Entry
112515825 CDS
T05604
Name
(RefSeq) transcription factor SPATULA
KO
K28361
transcription factor SPT/ALC
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
112515825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccav03000
]
112515825
Transcription factors [BR:
ccav03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
112515825
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Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Ribosomal_S20p
CENPU
Motif
Other DBs
NCBI-GeneID:
112515825
NCBI-ProteinID:
XP_024978531
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Position
LG 7:complement(4213110..4215435)
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AA seq
268 aa
AA seq
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MANLYDASAICSSYSPPPEPSDDISLLLRQILFKSSSSSSSPSPSLIPKQVQCEIQRQPP
PPHSSIPTYSSAAAANVPANGVAHVSSSSAGTIDYDPDEYDCESEEGFENLMEEMAAKRN
PPRNPSKRTRAAEVHNLSEKRRRSRINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQ
LQVQMLTMRNGINLYSMSAPSGVHEQDQRTGGLNQGNPPANMTVNQERLMNPMLSLPVPC
TGQNQPLVLDFSHSVNHEPTFGTQRGSS
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacttatatgatgcatctgctatttgttcttcatactctccgccgcctgaacct
tccgatgatatctcccttcttctccgtcaaatcctctttaagtcatcatcttcttcgtct
tctccttctccttctctcattcccaaacaagtgcaatgtgaaatacaacgacaaccgccg
ccgcctcattcctccatccctacatattcttccgccgcagctgctaacgttccggcgaac
ggcgtcgcccatgtctcttcttcttcagctggtacgattgattatgacccagatgaatat
gattgcgaaagcgaggagggttttgaaaatttgatggaagaaatggctgcaaaacgaaac
cctcctcggaatccatcgaaacggactcgagctgcagaggttcataatttgtctgaaaag
aggaggagaagcaggataaacgagaagatgaaggctttgcagaaactcatccctaattcc
aacaagacggataaagcttctatgttggatgaagccattgaatatctgaagcagctccag
ctccaggttcagatgttaacgatgagaaatgggataaatttgtactccatgtctgcaccg
tccggcgttcatgagcaggaccagagaacgggcggcttgaatcaaggaaacccgcccgct
aacatgaccgtaaaccaagaaaggctcatgaacccaatgcttagcctccctgttccatgc
accggtcaaaaccagccactcgtacttgatttttcgcattcagtcaatcacgaacccacg
ttcggaactcaacgtggatcgtcttga
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