Cynara cardunculus var. scolymus (artichoke): 112515827
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Entry
112515827 CDS
T05604
Name
(RefSeq) protein SHI RELATED SEQUENCE 1-like
KO
K27807
short internodes/stylish family transcription factor
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccav03000
]
112515827
Transcription factors [BR:
ccav03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
112515827
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DUF702
DUF7500
Motif
Other DBs
NCBI-GeneID:
112515827
NCBI-ProteinID:
XP_024978533
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Position
LG 7:complement(7073553..7075893)
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AA seq
333 aa
AA seq
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MAGFFSLGSATYHSQQDPNTNLPSNPTSNSNPTESSSWFLYSTTRNTHDRPTTTATTTTK
DFELWQQPHADGVHNLLTGGAVAMGGGGGDGRLINFSDESTWGSAAFVMMGHGVSGGGSG
GGGVSCQDCGNQAKKDCPHMRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQYISATQQD
QSRRRPHPTTKRTRSSQDHDNPNMVHPNAIAYNSSSGLEVGNFPSEVTTPANFRCVRVSS
IDETEDQFAYQAAVNIGGHMFKGILYDQGPEGQYMGGDTSSGGSAGIPQLNLTTASPGNS
TAAATFIGHSLYPSLGGNDYMTSTQFFHQISRD
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggctggcttcttctcattaggatctgcaacttaccatagccaacaagaccctaacaca
aacctcccttcaaatcccacttccaattctaatcctactgaatccagcagctggtttttg
tacagcacaacaaggaacacccatgaccgtcccaccaccaccgccactacaaccaccaaa
gatttcgaactatggcagcaaccccacgctgatggtgttcataatctgttaactggagga
gctgttgctatgggcggtggtggtggtgatggcaggctcataaatttctcagatgaatcc
acctggggatctgcggcttttgtgatgatggggcatggtgtcagcggcggcggcagtggt
ggtggtggggtgagctgccaggactgtgggaaccaggccaagaaagactgtcctcatatg
aggtgtaggacttgttgcaagagcagagggttccagtgccaaacgcacgtgaaaagcaca
tgggttccggccgccaaacgccgggagaggcaacaatatatctccgccacacaacaagat
cagagtcgccgtcgtcctcatccaaccaccaaaagaacaagatcctcccaagatcatgat
aaccctaatatggttcatcccaatgctatcgcttacaactcctcctcagggttagaggta
gggaatttcccctcagaagtgaccacacccgcaaacttcagatgcgtaagggtgagttcg
attgatgaaaccgaagaccaattcgcatatcaagccgcggtgaacataggtggacatatg
ttcaagggaattctctatgatcaagggcctgaaggtcaatacatgggtggcgacacctct
tccggtggcagtgctggtatcccgcagctaaatctcaccaccgcgtcccctggtaattcg
acggcggctgcaacttttatcggccattctctatatccatctcttggtggcaacgattac
atgaccagtacgcaattcttccatcaaatttcaagagattaa
DBGET
integrated database retrieval system
