Cynara cardunculus var. scolymus (artichoke): 112515841
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Entry
112515841 CDS
T05604
Name
(RefSeq) glutamate receptor 3.6-like isoform X1
KO
K05387
glutamate receptor, ionotropic, plant
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccav04040
]
112515841
Ion channels [BR:
ccav04040
]
Ligand-gated channels
Glutamate (ionotropic)
112515841
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Peripla_BP_6
Lig_chan-Glu_bd
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
112515841
NCBI-ProteinID:
XP_024978547
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All DBs
Position
LG 7:11193381..11198971
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AA seq
932 aa
AA seq
DB search
MGLNLVWGLLLVVVFFNGCFSKNASVPSRPDIVNIGAILTFDSIIGKVAKIALEAAVENV
NSDPAILNGTKLKITIHDSNFSGFASIMEALQFMESESVALIGPQTSVLAHMISHVVNEL
QVPLLSFTATDPTLSSLQYPFFVRTTHSDLFQMAAIADIVEYYEWRQVVAIYIDDDHGRN
GITSLADQLAAKRCKISQKAPIKPEATRADISDVLLQVALLESRVLVVHTYANWGLDILD
VAQHLGMMESGYVWITTNWLSTVIDISSPLPLKAINAMQGIITLKSYIQDSEVKRKFTSE
WKNLTNLGLSTYSLYAYDTIWILARALDEFFNQGRNVSFSKDLQLNNQSLGGFLNLDSLS
IFNGGKMLLENILRVKMNGTTGSTEFTSDKNLVFPAFEVINVIGTGVRRVGYWSNSSHLS
KSPPETVNTKLSNSSTSSELLYSVIWPGQTIKKPRGWVFPQNGKQLKIGVPHRVSFEEFV
EQVRGTDLYRGYCIDVFTSAINLLPYAVPYKFHSYGDGQTNPSITDLVSYIKAGRFDAAV
GDIAIITNRTRMADFTQPFIESGLVVVAPVRRLNSGTWAFLRPFTAKLWCVTGIFFLAVG
VVVWILEHRKNDEFRGPPKQQIITTLWFSFSTLFFSHKQNMMSTLGRIVLILWLFVVLII
SSSYTASLTSILTVQKLSSPIEGISSLILSKDPIGYQKNSFVRNYLVEELGISEARLVPL
GLPEDYEKALKDGPNNGGVAAVVDERPYIELFLSTRCQFSIVGQEFTKNGWGFAFPRDSN
LAVDISTAILKLSENGELQRIHDKWLIRGACSSQGAKFAVDRLELKSFKGLFFICGLACF
LALFIYLVLIIYQYIKHKPDLPESSGRSLRSGRLQTFISFVDEKEESVKARSKKRIKDAS
SRRSNGDDSSANDYRSTQRESPSEWSQNVDRS
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgaatctagtttggggattgttgttggtggtggtgttcttcaatggatgcttc
agtaagaatgctagtgttccttcaagaccagatatcgtaaatattggagccattttgact
tttgattccatcatagggaaagttgctaaaatcgcgctagaggctgctgtagaaaatgtg
aattctgatccagctatacttaatggaaccaagctgaaaataaccattcatgactccaat
ttcagtgggtttgcaagtatcatggaggctttgcagttcatggagagcgaaagtgtagcc
ttaatcggcccacaaacatcagtcttggctcatatgatctcccatgtggtgaatgaactc
caagtccctctactatctttcacagccacggaccccacactttcctcgcttcaatacccc
ttttttgtcagaactactcacagcgatctcttccaaatggctgccatagcagatatagtc
gagtactatgaatggagacaagtggtagccatttatatagacgatgatcatgggagaaat
ggaataacttcattagcagatcagttagctgctaaaagatgcaagatctcccaaaaagct
cctattaagcccgaagcaactcgtgcagatattagtgatgttttacttcaagttgcttta
ctggaatcaagagttcttgttgttcatacttacgctaattggggattagatatacttgat
gtagctcaacatcttggaatgatggaaagtgggtacgtttggattacaaccaattggctc
tctactgtcatagatataagttcgccacttcccttaaaagcgattaatgctatgcaagga
attattacattaaaatcatacattcaagattcagaagtgaaaagaaagtttacatctgaa
tggaagaacttgacgaatttgggtctgagtacttattctctgtatgcatacgacacgatt
tggattcttgctcgtgctcttgatgagttctttaatcagggtagaaacgtttctttctca
aaagatcttcaattgaataatcaatctttaggaggtttcttgaatcttgattctttgagc
atctttaatggcggaaagatgttgcttgaaaacatcttaagagtcaagatgaatggaaca
acaggatcaactgagttcacttctgataaaaatctggtttttcctgcttttgaagttata
aatgtgattggtactggcgttagacgagttgggtattggtcaaattcttcgcatctgtca
aaatctccaccagaaacagtcaatacgaagctttcaaacagttctacttcatctgagttg
ttatatagtgtaatttggcctggtcaaacgattaaaaaaccacgtggatgggttttccca
caaaacggcaaacagttgaagattggggttccacaccgagttagttttgaggagtttgtg
gaacaagttagggggactgatttatacagaggatactgcattgatgtgtttacttctgca
ataaacctgctgccatatgctgtcccatataagttccattcttacggggatggtcaaact
aacccaagtatcacagatctcgtgagctatataaaagctggtagatttgatgctgcggtg
ggcgatattgcgatcatcactaaccggacacgaatggcggattttactcagccatttatc
gaatctggactagttgtggtggcaccagtcaggaggctaaactctggaacttgggctttt
ctcaggccattcactgctaaattgtggtgtgttactgggatcttttttctagctgttgga
gtcgttgtttggattctagaacatcgtaaaaacgacgaatttcgtggccctcctaaacaa
cagatcatcacaaccctatggtttagcttttcgaccttatttttctcccacaaacagaac
atgatgagcactcttggtcgtatcgtgttaattctatggttattcgtggttctgataatc
agctccagttataccgcaagtctcacttcaatcttgaccgtacagaaactttcttctcct
attgaagggataagtagtttaatattgagcaaagatcccattggataccaaaaaaattcg
tttgttagaaactatctggttgaagaacttggcatttccgaagctagacttgttccactt
ggcttgccggaagattacgaaaaagccttaaaagatggtcctaacaatggcggtgttgct
gcagttgtcgatgaacgtccatatatcgaactcttcctttcgacccgctgccaattcagc
attgttggtcaagaatttaccaaaaacggatggggatttgcctttccacgggactctaat
ctcgcagtggatatctcgacggccattctaaaactttcagaaaacggagagttacaacgg
attcacgacaaatggctaatacggggcgcttgtagttcacaaggagcgaaatttgcagtg
gaccggcttgagctaaaaagcttcaaaggcctgttctttatatgtgggctagcttgtttt
cttgctcttttcatatacttggtgctgatcatataccagtatataaaacacaaaccggat
cttccggaatcttccggacgtagcctccgatcaggccggcttcagacattcatttcattt
gttgatgaaaaagaagagtcggttaaagcccgttccaagaaacggattaaagacgcaagt
tcacgtaggagtaatggagatgattcctcggcgaatgactatagaagcacgcagagagaa
tcgccttcggaatggtcacaaaatgtagatcgatcttag
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