Cynara cardunculus var. scolymus (artichoke): 112515920
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Entry
112515920 CDS
T05604
Name
(RefSeq) TGACG-sequence-specific DNA-binding protein TGA-1A-like isoform X1
KO
K14431
transcription factor TGA
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
112515920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccav03000
]
112515920
Transcription factors [BR:
ccav03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
Plant bZIP factors
112515920
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DOG1
bZIP_1
bZIP_2
DUF6468
CagS
bZIP_Maf
Motif
Other DBs
NCBI-GeneID:
112515920
NCBI-ProteinID:
XP_024978660
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All DBs
Position
LG 7:9449878..9465899
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AA seq
363 aa
AA seq
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MNSSSTQYLNSKRMDVYEPMHQFSMWGDFKGNIYQDASATMIIEVDAKLDNQSEDTSHTT
IGPSNQCDQEASKPGDKVLRRLAQNREAARKSRLRKKAYVQQLEVSRLKLLHLEQELEQT
RAQCALMSGGVNVCHLGFPGGANSVTPAGIAAFKMEYERWVEEQNKKTNALKTALHSPLP
DMELHILVDDTMNHYANLFTIKANAAKVDVCYLISGVWKTSTERLFLWIGGFRPSELLKV
LVPQLDLLDQQSHDLSNLIQACQQAEDSLSQGMEKLQQTLAEAVAFAHALGGGCYEMTNA
MDKLEELVRLVIQADYVRKEALQQTIRYLTTRQAAQGLISLGEYFQRLRDLSSAWAMRLC
EPA
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgaattcctcgtccactcagtatctcaactcgaagaggatggatgtatatgagccgatg
caccagtttagcatgtggggagatttcaaaggcaacatttatcaggatgcatctgcaacc
atgattatagaggtggatgcaaagctagacaaccagtcagaggatacttcacacacaaca
attggaccttcgaatcagtgtgatcaagaagcaagcaaaccaggtgataaggttctgaga
cgtcttgcacaaaatcgtgaagcagctcgtaaaagtcgtttgcggaaaaaggcctatgtt
cagcagttggaagttagtcgtctgaaattgcttcatctcgaacaagaacttgaacaaact
agggcacaatgtgctttaatgagtggtggagtcaatgtgtgtcatcttgggttccctgga
ggtgcaaactcagtaacacctgcaggaatagctgcattcaagatggagtatgagcggtgg
gttgaagaacaaaataaaaaaactaatgctttgaagacagcattgcattctcctttgcct
gatatggagttgcatatacttgttgacgacaccatgaaccactatgccaatctcttcacc
attaaagctaatgcagcaaaggttgacgtctgctatctcatatcaggcgtgtggaaaaca
tcaactgaacgtcttttcttgtggattggaggctttcgcccttcagaacttttaaaggtt
cttgtaccacagcttgacctcttggaccagcaatctcatgatctctctaaccttattcaa
gcatgccagcaagctgaagattctctctcacaaggaatggaaaaacttcagcaaactctg
gctgaggctgtggcttttgctcatgctttgggaggaggttgctatgagatgactaatgca
atggataagttagaagagctagtaaggcttgttatccaggcagattacgttcgtaaagaa
gccctgcaacagacgatacgctacctgaccacccgtcaagctgctcaagggttgatctct
ttaggcgagtatttccaacggcttcgtgatctgagttctgcttgggccatgcggctttgc
gaaccggcctaa
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