Cynara cardunculus var. scolymus (artichoke): 112516123
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Entry
112516123 CDS
T05604
Name
(RefSeq) katanin p60 ATPase-containing subunit A1-like
KO
K07767
katanin p60 ATPase-containing subunit A1 [EC:
5.6.1.1
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccav04812
]
112516123
Enzymes [BR:
ccav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
112516123
Cytoskeleton proteins [BR:
ccav04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
112516123
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
KATNA1_MIT
AAA_lid_3
Vps4_C
RuvB_N
AAA_5
TIP49
AAA_22
AAA_33
Mg_chelatase
AAA_16
AAA_28
AAA_14
IstB_IS21
RNA_helicase
AAA_17
PhoH
AAA_7
nSTAND3
AAA_24
Parvo_NS1
NPHP3_N
TsaE
Motif
Other DBs
NCBI-GeneID:
112516123
NCBI-ProteinID:
XP_024978903
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All DBs
Position
LG 8:complement(24801848..24809293)
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AA seq
524 aa
AA seq
DB search
MAGTSLAGLQDHLKLAREYALEGLYDTSVIFFDGAIAQINKHLSSLDDPMVCSKWTNVKK
NLLEETEVVKQLDAERRSLKDTLVGRRPSSPPISAKKSSFVFQPLDEYPTSSGAPMDDPD
VWRPPTRDTSNRRSARAAPGGTRKASQDGVWARGSTTKGGATARGGKVGASSKVNSGVRA
STTGKKGTGSGKSNTGKDDSGNGDTEEGKSKRGQYEGPDADLAATLERDVLDAAPGVRFD
DVAGLSEAKRLLEEAVVLPLLMPDYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTT
FFNVSSASLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCTSRGASGEHESSRRV
KSEVLVQVDGVNNTGTNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNLESRK
ELIKINLRTVEVASDVDIEEVARRTEGYSGDDLTNVCRDASLNGMRRKIAGKTREEIKNM
SKDDISNDPIAMCDFEEAITKVQPSVSAADIERHEKWFAEFGSA
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcacatcgcttgcaggattacaagatcatctgaaattggcaagagaatacgca
ctcgaaggtctctatgatacttccgtcatcttctttgatggcgccatcgctcagatcaac
aagcacttaagctccctcgatgatccgatggtttgttcaaagtggacaaatgtaaagaaa
aatctgttagaggagactgaagttgtgaagcaattggatgccgagaggaggtctttgaaa
gacactctagtgggtagaagaccttcgtcacctccaatttccgctaagaaatcatcgttt
gtttttcaaccattggatgagtacccaacttcttcgggtgctccaatggacgatcctgat
gtgtggagaccaccgactcgagacacttcaaatagaagatctgcaagagccgctccaggg
ggaacgagaaaggcatcacaagatggagtttgggctaggggttctactacgaaaggtgga
gcaacggctcgtggaggtaaggttggtgcttctagcaaggttaactcgggagttcgagca
tcgacgactgggaaaaaaggaactggttcagggaagtcgaacactgggaaggatgattcc
gggaatggtgatactgaagagggaaagtcaaaacgtgggcagtatgaagggcctgatgca
gacttggctgcaacactggaaagggatgtcttagatgccgcccctggagtgagatttgat
gatgttgcaggactgagtgaagccaaaagacttctagaggaagcggtggttcttccacta
ttgatgcctgattatttccagggaatcaggagaccttggaaaggcgttcttatgtttggt
ccacctggcaccgggaagacactactggctaaagctgttgctaccgagtgtggcaccaca
ttttttaacgtgtcttctgcgagcttggcttcaaaatggcgtggagagagtgaacgtatg
gttcgatgcttgtttgacctcgctagagcctatgcaccaagcacaattttcatcgatgag
attgactctctttgcacttcccgtggggcctcgggggaacatgagtcttcgaggagggtt
aaatctgaagttctagttcaagtagatggtgtgaacaacacgggaactaatgaagatggc
agtcgcaaaatcgtgatggttttggctgctaccaatttcccatgggatatagatgaagca
ctaaggcgacgtctggaaaagcgaatttatattcctctgcctaatctcgagagtaggaaa
gagcttataaagattaatttgagaactgtcgaggtagctagtgacgtggacattgaggag
gtagctcgtcgaacagaggggtatagtggtgacgatctaacaaacgtatgccgagatgct
tcgttgaacgggatgcggcgtaaaatagcaggaaaaacacgagaagaaataaaaaacatg
tcgaaagatgacatctcaaacgatccaatcgccatgtgtgactttgaagaagcaatcaca
aaggttcagccaagtgtatctgctgctgatatcgaacgccatgagaaatggtttgcagaa
tttggatctgcataa
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