Cynara cardunculus var. scolymus (artichoke): 112516165
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Entry
112516165 CDS
T05604
Name
(RefSeq) LOW QUALITY PROTEIN: calcium-dependent protein kinase SK5-like
KO
K02183
calmodulin
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04016
MAPK signaling pathway - plant
ccav04070
Phosphatidylinositol signaling system
ccav04075
Plant hormone signal transduction
ccav04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
112516165
04070 Phosphatidylinositol signaling system
112516165
04075 Plant hormone signal transduction
112516165
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
112516165
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccav01009
]
112516165
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112516165
03036 Chromosome and associated proteins [BR:
ccav03036
]
112516165
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccav04147
]
112516165
Protein phosphatases and associated proteins [BR:
ccav01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Calcineurin (PPP3/ PP2B)
Regulatory subunits
112516165
Membrane trafficking [BR:
ccav04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
112516165
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Centriole replication proteins
112516165
Exosome [BR:
ccav04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
112516165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_5
EF-hand_8
EH
EF_EFCAB10_C
Motif
Other DBs
NCBI-GeneID:
112516165
NCBI-ProteinID:
XP_024978955
LinkDB
All DBs
Position
LG 8:complement(8757048..8821614)
Genome browser
AA seq
208 aa
AA seq
DB search
MIDTDNSGYISFEELKDGLSSFGANLEESEIHDLMQAADIDKNGAIDYEEFVAATLHFNK
VDNEDSLYAAFSYFDKDGSGYXTVNEIQQSCXGIDNAQMEEIMKEADQNNDKFLQMWCEA
LIMLHQKFCLKIMVQKPITGVLVLWNVALIGNNSNGVIEKGKIGLCPDVIIRSWLSPEMT
SRSRRSERIVRRNPNDAEDSPIVAPINT
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgatagatacagacaacagtgggtacattagttttgaagaactcaaggatggacttagt
agttttggtgctaatcttgaagaatcggaaattcatgatcttatgcaagcggcggatatc
gacaaaaatggtgccatcgactatgaagaatttgtagctgcaaccttgcattttaacaaa
gtggataacgaagatagtctatatgctgctttttcgtattttgacaaagatggcagtggt
tatnnaaccgtgaatgaaatccaacaatcttgcnnaggaatagacaatgcacaaatggaa
gaaattatgaaagaagctgatcaaaacaatgacaagtttttacagatgtggtgtgaagcc
cttattatgttgcaccagaagttttgcttaaaaattatggtccagaagccgataactgga
gttctggtactctggaatgttgctcttattggaaataatagtaatggtgttattgagaaa
gggaaaattggcttatgcccagatgtgataatcagatcttggttgtcacctgagatgact
agtcgatctcgaaggtctgaaaggatcgtccgccgcaatcctaatgatgcagaggattcc
cctattgttgctcctattaatacatga
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integrated database retrieval system
