KEGG   Cynara cardunculus var. scolymus (artichoke): 112516419
Entry
112516419         CDS       T05604                                 
Name
(RefSeq) probable U3 small nucleolar RNA-associated protein 7
  KO
K14768  U3 small nucleolar RNA-associated protein 7
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ccav03009]
    112516419
Ribosome biogenesis [BR:ccav03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    112516419
SSDB
Motif
Pfam: BING4CT WD40_Prp19 Beta-prop_THOC3 WD40 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_1st WD40_Gbeta ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd EIF3I WDR55 Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_DCAF4 WD40_RFWD3 WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_Aladin Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_Nup120_160 Beta-prop_SCAP Beta-prop_HPS5 WD40_MABP1-WDR62_1st Beta-prop_VPS8 Cytochrom_D1 Beta-prop_CAF1B_HIR1 Beta-prop_Vps41 B-prop_COPA_B_2nd
Other DBs
NCBI-GeneID: 112516419
NCBI-ProteinID: XP_024979208
LinkDB
Position
LG_8
AA seq 525 aa
MEIQDISDDIDVKVKKYQRGEGADLEALKDKKLKGQLANREELYKKSANAAAKAEKWLMQ
TEAGRLESEGFEKTWRFSQQSIAQEVDVSSRKNQFDLVLPDLGPYTIDYTSSGRYMVTAG
RKGHLAIMDLHTMKPVKDFQVRETVRDVVFLHNETFFAAAQKKYTYIYNNAGTELHCLKE
HGAVLKLQFLKNHFLLSSINKFGHLHYQDITTGQMVGNYRSGLGRSDVLQVNPYNSVVAS
GHSGGTISMWKPTSAAPLVKMLCHHGPVTAIAFHPNGHLMATAGMDKKLKIWDLRKYEVL
QTLPGHAKSLDFSQKGLLASSTGSFVQILANSSDSQNYDRYMIHTMVKGYQIQKCLFRPY
EDVLGIGHSMGLSSILVPGSGEPNFDSWVANPFETLKQRREKEVRLLLDKLPPESIIMDP
TKIGTLRTSNKIQKATKEEKEAEKAAAIAAAKSGPQKKKTKGRSKPSKVAKKKQEGVEKA
KRPFAEENKHAEMVVSKKKQKRITEANELPKSLQPFVSRKAGVDI
NT seq 1578 nt   +upstreamnt  +downstreamnt
atggagatacaggatatttcggatgacattgatgtcaaagtaaaaaagtaccagagaggt
gaaggtgctgatttggaggcattgaaagacaaaaagttgaaaggccagcttgctaataga
gaagaattatataaaaagtctgctaatgctgctgctaaagctgagaagtggcttatgcaa
actgaggctggccgtctagaatctgaaggctttgaaaagacgtggagattcagtcaacag
tcaattgcacaggaagtggatgtttctagtagaaagaatcaatttgatcttgtcttacca
gatcttggtccttacactattgattacacctcaagtggccgatatatggtgacggcagga
cgcaaagggcatctggcgattatggacttgcatactatgaaacctgttaaagactttcag
gttagagaaactgtgcgcgatgtggtgtttttgcacaatgaaacgttttttgcggctgcg
caaaagaagtacacatatatatacaacaacgctggcacagaacttcactgtctgaaggaa
catggagctgtgttgaagcttcagtttctcaagaaccacttccttttgtcatccataaac
aaattcggccatcttcattatcaagatatcactactggccagatggtaggaaattaccgt
tctggccttggccgttcagatgttttgcaagtgaacccatataacagtgtcgtcgcctca
ggccattctggtggtacaatcagcatgtggaagcccactagcgctgcgccacttgtcaag
atgctgtgtcaccatgggcccgtcacagccatcgctttccacccgaacggccatctcatg
gccacggctggcatggacaagaaactcaagatttgggatttaaggaaatacgaggtttta
caaacactccccggccatgccaaatcattagatttcagccaaaaaggtctacttgcatcc
tcgacaggatcattcgtccaaatcttggcaaactcctcggattcccagaattatgatcga
tacatgatccacacgatggtaaaaggttaccagattcagaaatgtttgtttcgaccgtat
gaagatgttctgggaatcggacactcgatgggtttgtcgtccattctcgttcctggatcc
ggggagcccaatttcgactcatgggttgcgaatccattcgaaacattaaaacaaagaaga
gaaaaggaagtgcgacttcttctcgacaaactcccgccggaatccatcattatggacccc
acaaagatcggtactttgaggacttcaaacaagattcaaaaggcgacgaaagaggagaag
gaggcggagaaggcggcggccattgctgccgccaagagcggacctcaaaagaagaagacg
aaagggaggagtaagccgagtaaagtggcgaaaaagaagcaagaaggagtggagaaagcc
aaaaggccatttgcagaggaaaacaagcatgcagaaatggtggtttctaagaagaagcaa
aagagaattacagaagcaaatgaactaccaaaatctcttcagccatttgttagcagaaaa
gcaggggtggacatatga

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