KEGG   Cynara cardunculus var. scolymus (artichoke): 112516474
Entry
112516474         CDS       T05604                                 
Name
(RefSeq) ras-related protein Rab7
  KO
K07897  Ras-related protein Rab-7A
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04144  Endocytosis
ccav04145  Phagosome
ccav04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    112516474
   04145 Phagosome
    112516474
   04148 Efferocytosis
    112516474
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ccav04131]
    112516474
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ccav04147]
    112516474
   04031 GTP-binding proteins [BR:ccav04031]
    112516474
Membrane trafficking [BR:ccav04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    112516474
Exosome [BR:ccav04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112516474
  Exosomal proteins of other body fluids (saliva and urine)
   112516474
  Exosomal proteins of colorectal cancer cells
   112516474
  Exosomal proteins of bladder cancer cells
   112516474
GTP-binding proteins [BR:ccav04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    112516474
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA RsgA_GTPase ATP_bind_1 nSTAND3 AAA_16 Septin PduV-EutP AAA_7 cobW AAA_24 NTPase_1 AAA_22 ATPase_2 MCM SRPRB NACHT AAA_14 AAA_5 ATP-synt_ab
Other DBs
NCBI-GeneID: 112516474
NCBI-ProteinID: XP_024979306
LinkDB
Position
LG 8:complement(21893791..21901700)
AA seq 207 aa
MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVEFEDRLFTLQ
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVQKSFDDLNNWREEFLIQASPSDPENFPF
VVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQVIAKNALKSG
EEEEIYLPDTIDVGSSSQQRGASGCDC
NT seq 624 nt   +upstreamnt  +downstreamnt
atgccttcaagaagaagaacgcttctcaaagtcatcatcctcggggacagcggggttggc
aagacatctttgatgaatcaatatgtaaacaagaagtttagtaatcaatacaaggcaaca
ataggagccgatttcttgacaaaagaagtggaatttgaggatagactcttcaccctacag
atctgggacactgctggacaggaaagatttcagagcctcggcgttgcattctaccgtggt
gcagattgttgtgttcttgtgtatgatgtgaatgtgcagaagtcatttgatgatctcaac
aattggagggaggaattccttattcaggcaagcccttcagatcccgagaatttcccattc
gtggttctaggtaacaaagttgatgtagacggtgggaacagtagagtggtttctgagaaa
aaggctagggcttggtgtgcctcaaaagggaacattccatattttgagacatcagccaaa
gaaggaatcaatgttgaagaagcttttcaagtcatagctaagaatgccttgaagagtgga
gaagaggaagaaatatacttgccagatacgattgatgttggaagcagcagtcagcaaagg
ggggcctcgggatgcgactgctag

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