Cynara cardunculus var. scolymus (artichoke): 112516486
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Entry
112516486 CDS
T05604
Name
(RefSeq) exocyst complex component EXO84B-like
KO
K19986
exocyst complex component 8
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112516486
Membrane trafficking [BR:
ccav04131
]
Exocytosis
Tethering complex
Exocyst complex
112516486
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Gene cluster
GFIT
Motif
Pfam:
Exo84_C
VPS51_Exo84_N
COG2_N
Motif
Other DBs
NCBI-GeneID:
112516486
NCBI-ProteinID:
XP_024979319
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Position
LG 8:25841127..25850088
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AA seq
773 aa
AA seq
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MASKLSSRSRGGAPVKPNSKETGPKLEENLNIFKSDKFDADGFVNSKCNSLNEKEIRQLC
SYLLDLKKASAEEMRRSVYANYTAFIRTSKEISDLEGELLSIRNLLSTQATLIHGLAEGV
HVDSLSITVPGGSSSNGLSPDVDRDPSDLENWLIEFPDILDVLLAERRVEEALATLDEGE
RVASEAKEKDSLSPVVLKSLQTAITECRQRLANQLADAASQPTTRGSELRAAISALKKLG
DGPRAHSLLLQAHYQRLQSNMQNLRPSSTSYGGAYTAAISQLVFSVIAQTATDSNAIFGN
EPAYSSELVMWATKQTEDFALLVKRHALASSAAAGGLRAAAECVQIAMGHCSLLEARGLA
LCPVLLKLFRPSVEQALGANLKRIEESTAALAAADDWDLSSSPTVTRLSGRPSSTSHNTI
SAYQHKLSSSAQRFNLMVQDFFEDVGPLLSMQLGGKMLEGLFHVFNSYVSMLIRALPGSM
EEEANYEGSGNKIVRMAETESQQMALLANASLLADELLPRAAMKLTPVAQAIYKDDPRRR
PSDRQNRHPEQREWKRRLASIVDRLKDSFCRQHALDLIFTEDGDSHLTADMYINMDGSIE
EIEWFPSPIFQELYAKLYRMSAIAAEMFVGRERFSTMLLMRLTETVILWLSEDQTFWDDI
EEGPRPLGHLGLQQFYLDMKFVISFASQGRYLSRNLNRVVNEIISKALASFAATGVDPYG
VLPEDEWFGDICQEAIERLSGKPRLANGERDLSSPTASVSAQSISSIRSHGSS
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaagttgtcatcccgctctagaggaggcgcccctgtaaagcccaactccaag
gaaaccggccctaagctcgaggaaaatcttaacatcttcaagtccgataaattcgacgcc
gatggctttgtcaattccaaatgtaattccttgaacgagaaggagataaggcaattatgc
tcatatctattggatttgaagaaagcttctgcagaggaaatgcgtaggagtgtctatgct
aattatactgcattcatacgcacatcaaaagagatatcagatttagaaggtgagctactg
tcgataagaaacttgctatctactcaggctaccttaattcatggtctagctgagggggtc
catgttgattctttgtctatcactgttcctggtggttcctcttcaaatggattatctcct
gatgtagacagagatccttcagacctagagaattggttaattgagttccctgatatcctt
gatgttctgttagctgaaagaagagtggaggaagctttggctacccttgatgaaggggaa
cgtgtagcttctgaagcaaaagaaaaggattcactgagtcctgttgttttgaagtccttg
cagacggctataacagaatgtcggcaaagactagccaatcagcttgctgatgctgcttct
caacctacaacacgtggcagtgagcttcgtgcagctattagtgctcttaaaaagcttgga
gatggccctcgtgcccacagtctactgctccaagcacattatcaaaggcttcaaagcaac
atgcaaaatcttcgtccttctagcacctcatacgggggagcatatacagcagctatttcg
caactggtattttctgttattgctcaaacagcaactgactctaatgctatttttggtaac
gaaccagcttatagctctgagcttgtgatgtgggctacgaaacaaacagaagactttgct
cttcttgttaaaagacatgcattagcttcatctgctgctgctggtgggttaagggctgct
gctgaatgtgttcaaatagctatgggacattgttctttgttggaagctcgtggtttggca
ctgtgtcccgtgctcttgaaactttttaggcctagtgttgaacaggcgcttggtgcaaat
ttaaagcgaattgaagagagtactgctgcattggctgcagctgatgattgggatctttct
tcttccccaactgttactcgtctatctggaaggccttcaagtacatcccataataccata
tcggcttatcaacataagctctcaagtagtgctcaaaggttcaatttgatggttcaggat
ttctttgaggatgtagggccactgctaagcatgcagttgggcggtaaaatgttggaggga
ttgttccatgtgttcaattcttatgttagcatgctcattagagcactcccgggctccatg
gaagaagaagcaaactacgaaggctctgggaataaaatagttcggatggctgagactgaa
tcccaacaaatggcattgcttgcaaatgcatccttgttagctgatgagctattacctcgt
gcagccatgaagcttacccctgtagcacaagccatttacaaggatgatcctcgtagaaga
ccctcagatcggcaaaatcgacaccctgagcaaagggaatggaagaggcgtcttgcaagc
atagtagatagattgaaggatagcttctgcagacaacacgctctagatcttatctttact
gaagatggtgatagccatctgactgcagacatgtacataaatatggatggaagtattgag
gaaatagaatggttcccttctccaatatttcaggaactttatgcaaaactttacaggatg
tctgctatagcagcagaaatgtttgttggcagggaacgtttttcgacaatgttattaatg
aggcttacagaaactgtcatcttatggctttcagaagaccaaactttttgggatgacatt
gaagaaggaccgaggcccttaggtcatctcggcctacagcagttctatttggatatgaag
tttgttatctcctttgcctcccaaggacgttacttatctcgaaatttaaatcgagtcgtg
aatgagatcatatctaaagctcttgcatcctttgctgcaacgggagtggatccatatggt
gtacttcctgaggacgagtggtttggtgatatatgtcaagaagcaatagagaggttgagc
gggaagccaagattagccaatggggaacgagatctaagcagcccgactgcttctgtttca
gcacaatcaatatcatccatcagatctcatgggagctcctaa
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