Cynara cardunculus var. scolymus (artichoke): 112516555
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Entry
112516555 CDS
T05604
Name
(RefSeq) pathogenesis-related protein PR-1 type-like
KO
K13449
pathogenesis-related protein 1
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04016
MAPK signaling pathway - plant
ccav04075
Plant hormone signal transduction
ccav04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
112516555
04075 Plant hormone signal transduction
112516555
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
112516555
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Gene cluster
GFIT
Motif
Pfam:
CAP
MPN_270
Motif
Other DBs
NCBI-GeneID:
112516555
NCBI-ProteinID:
XP_024979436
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All DBs
Position
LG 8:20019435..20019960
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AA seq
163 aa
AA seq
DB search
MGYSNNISLLIFVMSMAILHFSRAQNSPQDYVNAHNRARAQVGVGPMTWDSRVASFAQNY
ANQRRGDCQMRHSQNRPYGENLAGGSGFELTGVGAVNLWVGEKANYNYNSNTCAPGKVCG
HYTQVVWRKSVRLGCARVKCNNGAWFVTCNYDPPGNYVGEKPY
NT seq
492 nt
NT seq
+upstream
nt +downstream
nt
atgggctactcgaataacatctcacttcttatttttgttatgtccatggcaattctacat
ttttcccgagcccaaaactcgccacaagactatgttaatgctcataatcgagctcgggca
caggttggtgtggggcccatgacgtgggatagtcgtgtggctagctttgcgcaaaactat
gcaaatcaaagacgaggtgattgtcaaatgaggcactcacaaaacagaccctatggtgag
aatcttgccggtgggtcagggtttgagctcacaggtgtgggtgcggtgaacttgtgggtc
ggagagaaggccaactacaattacaattcaaacacttgcgctccggggaaggtgtgtggg
cattatacscaggttgtttggcgcaaatcggttcgccttggttgtgctagggtaaaatgc
aataatggagcatggttcgtgacatgcaactatgatcccccaggcaactatgttggggag
aaaccttattga
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