Cynara cardunculus var. scolymus (artichoke): 112516623
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Entry
112516623 CDS
T05604
Name
(RefSeq) 26S proteasome regulatory subunit 8 homolog A-like
KO
K03066
26S proteasome regulatory subunit T6
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
112516623
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ccav03051
]
112516623
Proteasome [BR:
ccav03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
112516623
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_lid_PRS2_C
AAA_5
AAA_2
AAA_16
nSTAND3
AAA_22
PRS7_OB
RuvB_N
TIP49
AAA_28
AAA_33
AAA_24
AAA_3
Mg_chelatase
NPHP3_N
PhoH
AAA_14
AAA_18
Parvo_NS1
ATPase
RNA_helicase
ABC_tran
AAA_17
IstB_IS21
DUF815
AAA_19
AAA_7
OapC
AAA_25
AAA_11
TsaE
Sigma54_activat
DUF5906
bpMoxR
RsgA_GTPase
Zeta_toxin
DMPK_coil
Motif
Other DBs
NCBI-GeneID:
112516623
NCBI-ProteinID:
XP_024979540
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Position
LG 8:4565598..4571537
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AA seq
420 aa
AA seq
DB search
MATADIAMKPADSGEKHEICSSRHTTAKQGEGLRQYYLQHIHDAQLQVRQKSHNLNRLEA
QRNDLNSRVRMLKEELQLLQEPGSYVGEVVKVMGKSKVLVKVHPEGKYVVDIDKSIDITK
ITPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIEL
PIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEG
SRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEAS
NKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEDSRFDILKIHSRKMNLMRGIDLKK
IAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMKKETEKNMSLRKLWK
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagcggatatagcgatgaaaccagctgattcaggggagaaacacgaaatctgt
tcatcgaggcacacgacggcaaaacagggtgagggtttgaggcagtactacttgcagcat
attcacgatgctcagctccaggtccgccagaagagtcataatctcaatcgtcttgaggct
cagcggaatgatctaaattctcgagtaaggatgcttaaggaagagttgcaactccttcaa
gagcctggatcttatgttggtgaagttgtcaaagtaatgggaaaatcgaaggtcctagtg
aaggtccaccccgagggtaaatatgtggttgatattgataaaagcattgatattaccaag
attacaccttcaaccagggtcgcacttcgcaatgatagctatgtccttcatttggttttg
ccaagcaaagtagatcctctggtgaaccttatgaaagttgagaaggttcctgattctact
tatgacatgattggtggacttgaccagcaaattaaagagattaaggaggttattgaactt
ccaatcaaacatccggagttatttgagagtctgggaattgctcaaccaaagggagttcta
ttatatgggccaccaggtaccgggaagacattgttggccagagccgtggctcatcatact
gattgtactttcattagggtctctggttctgaactagtacaaaaatatatcggagaaggc
tccagaatggttagagaactttttgttatggccagggaacatgccccatcaatcatattt
atggatgaaattgacagtattggatctgctcgtatggagtctggaagcgggaatggtgac
agtgaagttcagcgaacaatgctggagcttcttaatcaactggatgggtttgaagcatca
aacaagatcaaggttttgatggctacaaatcgtatcgatatcctggaccaggctcttctc
aggcctggaagaatcgacaggaagattgaattcccaaatccaaatgaagactcgaggttt
gacatcttgaaaattcattcaagaaagatgaacttaatgcgtggcatcgatctgaaaaag
attgctgagaagatgaatggtgcttcaggtgctgaacttaaggcggtatgcacggaggca
gggatgtttgctttgagagaaaggagagttcacgtgacacaggaagatttcgagatggcg
gtggccaaggttatgaagaaggaaacggagaaaaacatgtcgctacgcaagctctggaag
taa
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