KEGG   Cynara cardunculus var. scolymus (artichoke): 112516638
Entry
112516638         CDS       T05604                                 
Name
(RefSeq) THO complex subunit 7A-like isoform X1
  KO
K13176  THO complex subunit 7
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    112516638
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccav03019]
    112516638
   03041 Spliceosome [BR:ccav03041]
    112516638
Messenger RNA biogenesis [BR:ccav03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     112516638
Spliceosome [BR:ccav03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    112516638
SSDB
Motif
Pfam: THOC7 DUF4844 ArsR SH3BP4_C L1R_F9L
Other DBs
NCBI-GeneID: 112516638
NCBI-ProteinID: XP_024979569
LinkDB
Position
LG 8:complement(3685468..3696369)
AA seq 242 aa
MLKPRKVSGRGETTGGAAHYAFGALEDDMIIKHRLLTRTTTTRGEPPLKKLQKKFTAFAL
ETEKDAENFADCERLAKAFLQELKTFELPLVKTKAVIDANVREKENFNELNDEINRKIVE
AQDDIEDLKRQLEESKVERKHKEECETIRKLIAAQQPRYETQKLINELEKEIAALEAENT
ASSRTLELRKKQFALLLHVVDELQNTIEEEQKSMVEEMRMAMYENKNIVEDVAGSSEAMA
ID
NT seq 729 nt   +upstreamnt  +downstreamnt
atgttgaaacctaggaaagttagtggtaggggagaaacaacgggtggagctgcacactat
gcatttggagccctagaagatgatatgattatcaaacataggcttctcacacgaacaaca
accacaaggggtgaacctcctttaaaaaagcttcaaaagaagttcactgcttttgctctg
gaaactgagaaggacgcagagaactttgctgattgtgagaggcttgccaaggctttcttg
caggagctgaagacttttgagctccccttggtgaagacgaaggcagttattgatgcaaat
gtgagagagaaggagaatttcaatgagttgaatgatgagattaataggaagatagtggag
gcacaagatgatattgaggatttgaagaggcaacttgaggagagcaaggtggagaggaag
cataaggaggagtgtgagacgattaggaagttgattgctgcacagcagcccagatatgag
actcagaagctgattaatgaactggagaaggagattgcagcattggaagcagagaatact
gcaagttcaaggacactggaacttcgtaaaaagcaatttgctcttttgttgcatgtggtg
gatgagttacagaacaccatcgaggaagagcaaaagagtatggtggaggaaatgcgaatg
gcgatgtacgagaacaagaacattgtggaggatgttgctgggagttcagaagctatggcc
attgattaa

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