KEGG   Cynara cardunculus var. scolymus (artichoke): 112516650
Entry
112516650         CDS       T05604                                 
Name
(RefSeq) putative lysine-specific demethylase JMJ16 isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ccav01009]
    112516650
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ccav03036]
    112516650
Enzymes [BR:ccav01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     112516650
Protein phosphatases and associated proteins [BR:ccav01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     112516650
Chromosome and associated proteins [BR:ccav03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    112516650
SSDB
Motif
Pfam: JmjC FYRC JmjN zf-C5HC2 FYRN KDM5_C-hel
Other DBs
NCBI-GeneID: 112516650
NCBI-ProteinID: XP_024979586
LinkDB
Position
LG 1
AA seq 1158 aa
MMGTELIRHHVKEESMDIPSIPPGFESLTAFSLKRVEDSKVASTSSVSVSASELQPAKKE
PGLEQSDDEKIKRSIRRRPWINYSQLNSSSGDESESEQNQTSSARMTKGVIRGCEKCSNC
QKVIAKWWPEEARRPDLLEAPVFYPNEEEFEDTLKYISSIRDKAEAYGICRIVPPSSWKP
PCPLKESAVWENSTFATRIQRVDKLQNRDSLSKMCRPGCNKKRKKRRCTKAGIDQKIYGS
DIAAPADVMVPEAGFGFEPGPRFTLGEFKKYADDFKTQYFRKNEMMTDACGNSVIQDQWE
PSLENIEGEYWRMVERPTEEIEVLYGADLETGSFGSGFPKETCQVSGSDEKYVRSGWNLN
NFPRLPGSLLSYESSDISGVLVPWLYIGMCFSSFCWHVEDHHLYSMNYMHFGASKMWYGI
PGKDAIKLEAAMRKHLPDLFAEQPDLLHKLVTQLSPSILKSEGVPVFRCIQNPGEFILTF
PRAYHSGFNCGFNCAEAVNVAPVDWLPHGHNAIELYREQGRKTSISHDKLLLGAARDAVK
AHWELNLLRKNTPDNLRWKDVCGKDGILSQTLKARVEIERVRRDFLCNTSQALKMEATFD
ATSERECSVCYFDLHLSAAGCHHCSPDKYSCLNHAKQFCSCAWSAKFFLLRYDIKDLSIL
VEALEGKLSAVYRWAKLDLGLALTSYVSKDTSRSPELNGKQSCSISGSPAKEVSSVPSVA
SLKGKTERVQDFLNPTGVGGRMGSRYSKESSISLNSLHEDETKKSSSKCKKEIASSANKP
LVVGNDVILLSDDEGEDSSLPLNQAVTTDPVSGRIGSEDQVKEDALKSHPENLSCHRVLS
ENTVPSTTKSQALTITKESSNLNGENTGGVSQPIPKSGGGILNNEEKVVIIGLYANSKPA
DNVQTASGTQSCTQNHPERNPRQKGPRIAKVVRRINCHVEPLEFGVVQSGKLWCDSRAIY
PKGFRSRVKYINVSDPTDMCYYVSEILDAGKNRPLFMVSLEKHPNEVFIHLSAARCWEMV
RERVNYEISKQHKSGIPNLPPLQPPGSLDGMEMFGFSSPSILQGIQSMDRHRLCTEYWES
RPFHSQSHDQAGKSSSKIQDPNNPENNGLTSEVDTVVSGFFKKANLEELNTLLSVLSSND
STGGVTRLLKNEIGGRPR
NT seq 3477 nt   +upstreamnt  +downstreamnt
atgatggggacggaactcatcaggcatcacgttaaagaagagagcatggatattccttcg
attccaccagggtttgagtctcttacggccttttctttgaaaagggttgaggatagcaaa
gttgcatctactagttctgtttctgtgagtgcttctgaattgcagccagccaagaaggaa
ccagggctcgaacaaagtgatgatgaaaagataaagaggtcaattaggcgtagaccttgg
ataaactacagccaattaaatagcagttcgggagacgagtctgaatctgagcagaatcaa
acttcaagtgctcggatgactaagggggttattcgtggatgtgaaaagtgtagtaactgc
caaaaggtcattgcaaaatggtggccagaagaagctcgaaggcccgatcttcttgaggct
cctgtattttatccaaatgaagaggagtttgaagatactcttaagtacatttcaagcata
cgtgataaagctgaagcatatggcatttgccgtattgtaccaccttcatcatggaaacct
ccatgccctcttaaggaaagtgctgtatgggaaaattcgacatttgctactcgtatccag
agggttgacaaacttcagaatcgggattcgttgagcaaaatgtgtagacctggttgcaat
aagaaaaggaagaagagaagatgcacgaaagcagggatagatcaaaagatttatggatcg
gatattgcagctcctgctgatgtgatggttcctgaagctggttttggtttcgaacctggt
ccaaggttcacccttggagagtttaaaaaatatgcagatgatttcaagacccagtatttc
agaaaaaacgaaatgatgacagatgcatgtgggaactctgttatccaagatcagtgggaa
ccctctttagaaaatatagagggtgaatattggcgcatggtagagaggcctaccgaagaa
attgaggtgctttatggtgctgatttggaaactggttcatttggtagcgggttcccaaaa
gaaacttgccaagtgtcagggtcagacgaaaagtacgttagatctggttggaacttgaat
aactttccgaggcttccaggctcactactctcctatgagagcagcgatatatctggtgta
ttggtcccttggttgtacattggaatgtgtttttcttctttttgttggcatgttgaagac
catcatctatattcgatgaattacatgcatttcggtgcttcaaagatgtggtatggcata
ccggggaaagatgctattaaattggaggcagcaatgagaaagcatttgcctgatcttttt
gcggaacaacccgacttgcttcacaaactggtcactcaactctctccatccatactaaaa
tccgaaggagttcctgttttccgctgcattcagaatccaggagagtttattttgaccttt
cctcgagcatatcattcaggattcaattgtggcttcaactgtgcagaggctgtgaacgtg
gctcctgttgactggttgcctcatgggcataatgccattgagctctatcgtgagcagggc
cgaaaaacttccatttctcatgataaactgttgcttggagctgcaagagatgcagtgaaa
gctcattgggaacttaatttactcagaaagaacacacctgataacttaagatggaaggat
gtttgtgggaaggatgggatcctatcccaaacacttaaggcgcgtgtggaaattgagcgt
gtgaggagggacttcctttgcaacacttcccaggcgttgaagatggaggcaacgtttgac
gccacaagtgaaagagaatgtagtgtttgctattttgacttgcatctatcagctgcaggt
tgtcaccattgttcacccgataagtattcatgcttaaatcacgcaaaacagttttgctct
tgtgcttggagcgcaaagttttttcttctccgctatgacatcaaagatttatctattttg
gttgaagcattggagggcaaattgagtgccgtatacagatgggcaaaacttgatcttgga
cttgctctaacttcttacgtatctaaagacacctcacgctccccagagctcaatggcaaa
caatcgtgctccatttcaggatcaccagccaaagaggtgagttcagtaccatctgttgct
tcactgaaagggaaaacagagagggtccaagatttcttgaacccaactggggttggtggt
aggatgggttcaagatattcaaaggaatcatcaatatcgcttaattctttacatgaagat
gaaacaaaaaaatctagttctaaatgcaagaaagagattgcgtcttcggcaaacaagcct
ttggttgttggaaatgatgttatattgcttagtgatgatgagggtgaggactcttccctg
ccacttaatcaagccgttacgactgatccagtttctgggcgcattggaagtgaagatcaa
gtgaaagaagatgccctcaagtcccacccggaaaacctttcttgccacagagttttgtcg
gaaaataccgtcccctctactacgaaatcacaagctcttacaattacaaaggaatccagt
aacttaaatggggaaaatacaggtggggtgtctcagccgataccaaaatctggcggtggg
atacttaacaatgaggaaaaagttgtaattattggattatatgctaactcaaaaccagca
gacaatgtacaaactgcatcaggaactcagtcttgcacccaaaaccatccggaaagaaac
cctcgccagaagggtcctcgcattgcgaaagttgtccggaggataaactgtcatgttgag
cctctggaatttggtgtggtccaatcaggaaagttatggtgcgatagtcgtgccatttac
cctaaaggttttcggagccgggttaagtacataaatgtttcagatcctacagatatgtgc
tactacgtttcagaaattcttgatgcgggaaagaatagacctctttttatggtttcgttg
gagaagcatccaaacgaagtatttattcatttatcggctgcaagatgttgggaaatggtt
agggagagagttaattatgagatctcaaagcaacataagtcgggaataccgaatcttcct
cctttgcagcctcctgggagtcttgatggcatggaaatgttcggtttttcttcgccttcc
atcttgcagggtattcagtcgatggacaggcatcggctatgcacagagtactgggaatca
cggccttttcactctcaatcccatgaccaagctggaaagtcgtcgtcaaagattcaagat
ccaaacaatcccgaaaacaatggtttgactagcgaggttgatactgttgtctcgggcttc
ttcaaaaaggcgaatttggaggagctaaacacgttgttgagtgttttgagtagcaatgat
tcaactggcggggtaactagacttctgaagaacgagattggcggacgcccgagatga

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