Cynara cardunculus var. scolymus (artichoke): 112516684
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Entry
112516684 CDS
T05604
Name
(RefSeq) glutamate receptor 3.4
KO
K05387
glutamate receptor, ionotropic, plant
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccav04040
]
112516684
Ion channels [BR:
ccav04040
]
Ligand-gated channels
Glutamate (ionotropic)
112516684
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Peripla_BP_6
SBP_bac_3
Lig_chan-Glu_bd
Motif
Other DBs
NCBI-GeneID:
112516684
NCBI-ProteinID:
XP_024979644
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Position
LG 8:complement(23241896..23247336)
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AA seq
938 aa
AA seq
DB search
MKPSLLVFGMWVMMMVVVAMAVKGKTGDTTVDSSSSSWRIPRVVNIGALFTVDSVIGRSV
KPAIEAAIDDVNSNPTVLAGTRLNLILHDTNCSGFLGTVEALQLMANDVVAAIGPQSSGI
AHIISHVVNELHVPLLSFGATDPTLSALQFPFFVRTSQNDYFQMSAVADLVAYFDWQEVI
AIFVDDDYGRNGITALGDALSKKRAKISYKASFAPGATQTDITELLVRVNLMESRVYVVH
VNPDSGLEIFTAAKKLGMMTNGYVWITTDWLPAVLDSSEFLDPETTEQVQGVVSLRQHTS
NSDAKKSFTTKWKGIKDKETSSFNSYALYAYDSVWLLAHSLDKFLKSGKRITFSYDSKLR
DTNRSDLRLSALRIFNEGEQLLETVLATSFVGLTGEVKFDPDKNLIHPAYDVVNIGGAGL
RTIGFWSNHSGLSVASPESLYTKASNHSAGNQHLYSIIWPGETSTKPRGWVFPNNGKPLR
VAVPYRYSYKEVVTKDKSPQGVRGYCIEVFEAAVSLLPYPVPRKYVLFGDGQRNPSYNDL
VNAVAEHKYDAAVGDVTIITNRTRIVDFTQPYMESGLVIVVAAKELKPKPWAFLKPFTVE
MWVVTGGFFLFVGFVVWILEHRLNHEFRGPPRQQIITIVWFSFSTMFFSHRENTVSTLGR
FVLILWLFVVLIINSSYTASLTSILTVQQLSSHIEGIDSLISSNDPIGVQDGTFAYNYLI
RELNIAESRIKPLKGEEEYENALQLGPKGGGVAAIVDELPYVELFMRYTKCKFKIVGQEF
TKSGWGFAFQRDSPLALDLSTAILQLSENGDLQQIHDKWLSSASCSTQNNDDVENSLSLN
NFWGLFLICGVTCFISLGIFFCRMLCQYRRFNPDEEEAGHEIVEPDSASRSDRRSSRAIN
FKDLMDFYDKKEAEIKEMLRRNGRQASRDSYDHTDSPS
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaagtttattggtttttggtatgtgggtgatgatgatggtggtggtggctatg
gcggtcaagggtaaaactggagatacaacagttgattcatcatcgtcgtcttggagaatt
cctagggttgtcaatattggagctttattcactgtggattcggttattgggcggtctgtg
aaacctgctattgaagctgccattgatgacgtcaattctaatccaactgttcttgctgga
actcgactcaaccttattttgcatgataccaattgcagtgggtttcttggcacagttgaa
gctttgcagctgatggcgaacgatgtggtggccgcaatcgggccgcaatcctccggcatc
gcgcacataatttcccacgtcgtaaacgaacttcacgtaccgctcctttcgtttggtgca
acagatcccacactttcagctcttcaattccctttctttgttcgtacctcacaaaacgac
tacttccaaatgtcggccgtagccgatttggtcgcatatttcgattggcaagaagtcatc
gccatattcgtagacgacgattatggcagaaacgggatcacagctttgggcgatgccctt
tccaagaaacgagccaagatttcatataaagcttcatttgccccaggtgcaactcaaact
gacattactgaactactagtcagagtcaatttgatggaatctcgagtttacgtcgttcac
gtaaatcccgattcaggtctcgagattttcacggcggcaaagaagcttggaatgatgaca
aatggttatgtttggattacgacagattggcttccggcggttttggattcgtcggagttt
ctggatccggaaacaacggagcaagtacaaggtgtggtgtcgctccggcaacatacgtcg
aattccgatgccaagaaatcttttacaacgaaatggaagggtattaaagataaagagaca
tctagttttaattcatatgctctttatgcttatgattctgtatggttacttgcacattct
cttgacaaattcttgaaatcaggaaaacggataacgttttcatatgattctaagcttcga
gacactaatagaagcgatcttcggttatcggctcttcggatttttaacgaaggagagcag
cttctcgaaacggttctagccacgtcgttcgtgggtttgaccggtgaggtgaagtttgac
ccggacaagaacttgattcatccggcctatgatgttgtgaacataggtggggccggttta
cggaccatcgggttctggtcgaaccattctgggctctcggttgcttctcctgaatcgtta
tacacaaaggcttcaaaccattctgctggtaatcaacatctttatagtattatttggccc
ggtgaaacgagtacaaagcctcgaggatgggtttttccgaacaacggtaagccgttgaga
gttgcggtgccgtataggtatagttataaagaagttgtgacgaaagataagtctccgcaa
ggggtaagaggatattgcatcgaggtttttgaagctgccgtgagtttacttccgtacccg
gtccctcgaaagtacgtattattcggcgatggtcaaagaaacccgagctacaacgatctt
gtgaacgcggttgcagaacataagtatgatgcagcagttggagatgttactatcattaca
aaccgaacgaggatcgttgactttacgcagccgtacatggaatccgggctcgtaatagtt
gttgccgccaaagaactgaaaccgaaaccatgggcatttctcaagccgttcaccgtcgag
atgtgggtggtcaccggtggattctttcttttcgttggattcgtcgtttggattctcgag
catcggttgaaccacgagttccgtggaccaccaaggcaacaaatcatcacaatcgtctgg
tttagcttttcaacgatgtttttttcgcacagagagaacaccgtgagcacgttgggacgg
tttgttctcattttgtggctgtttgtagtgttgattattaattcgagctacacagccagt
ttgacatcgatcctcacggtacaacaactgtcttcgcatattgaagggatcgatagtttg
atctcaagtaacgacccgattggagttcaagatggaacttttgcgtataattatttgatt
cgagagctcaatatcgcagagtctagaatcaaaccattgaaaggtgaggaagagtatgaa
aacgcactccagttaggtcctaaaggcggcggcgtggcggccattgttgacgagcttccg
tatgtcgagctcttcatgcgttacaccaagtgcaagttcaagattgttggccaagagttc
accaaaagcggttggggtttcgcattccaaagagactctcctctagcactcgacctctcg
acagccattctccaactctcggaaaatggagatctgcaacaaatccacgacaaatggttg
tcttctgcctcgtgctcgactcaaaacaacgatgacgtagaaaacagcctctccctcaac
aacttctggggcctattcctcatttgcggcgtcacgtgcttcatttcgctcggcattttc
ttctgccggatgttgtgtcagtaccgtcggtttaatcccgatgaagaagaagctggtcac
gagatcgtggagccggactccgcgagtcgcagcgatcgacgatcatcacgcgccattaat
ttcaaggatttgatggatttctatgataagaaagaggcagaaatcaaggaaatgcttagg
cgaaatgggcgtcaagctagcagggactcatatgaccatactgattcaccttcctaa
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