Cynara cardunculus var. scolymus (artichoke): 112516718
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Entry
112516718 CDS
T05604
Name
(RefSeq) probable indole-3-acetic acid-amido synthetase GH3.1
KO
K14487
auxin responsive GH3 gene family
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
112516718
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GFIT
Motif
Pfam:
GH3
GH3_C
GH3_M
AIG2_2
Motif
Other DBs
NCBI-GeneID:
112516718
NCBI-ProteinID:
XP_024979689
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Position
LG_8
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AA seq
595 aa
AA seq
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MAVDALCSPLGPPACEKDAKALQFIEEMTRNADAVQENVLAEILCRNSQTEYLRLHNLGG
ATDRETFKSKIPMVTYEDLQPIIERIANGDRSPILSSHPISEFLTSSGTSAGERKLMPTI
REELDRRQLLYSLLMPVMNLYMPGLDKGKGLYFLFVKSETKTPGGLLARPVLTSYYKSDH
FKTRSFDPYNVYTSPNEAILCPDSFQSMYSQMLCGLYERQQVLRLGAIFASGLLRAIRFL
QLNWRVLAHDIRTGTLNAKIFDSDIRRCMTQVLRSDPELADFIESECSKDNWERIITRIW
PNTKYLEVIVTGAMAQYIPTLDYYSGGLPKVCTMYASSECYFGLNLNPMCKPSEVSYTIM
PNMAYFEFLPHDPNSQSGATGDKLVDLVNVQVGKEYELVITTYAGLCRYRVGDILRVTGF
HNSAPQFHFVRRKNVLLSIDSDKTDEAELQTAVDNASKLLNEFNTSVVEYTSYADTKTIP
GHYVIYWELLVKDSANFPRDDVLEGCCLAMEESMNSVYRQGRVECNSIGALEIRVVKNGT
FEELMDYAISRGASINQYKVPRCVNFTPIMELLDSRVVSSHFSQSLPHWTPERRR
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggcggttgatgctctgtgttcaccgttgggaccgccggcatgtgagaaagatgcgaaa
gcgcttcaattcatcgaggagatgacaagaaacgccgacgccgttcaggagaatgtgctg
gcggagatactttgtcggaattctcagacggagtatctccgacttcacaatctcggtggc
gctaccgatcgagaaactttcaagtccaagattccgatggtaacttatgaagatcttcaa
ccgatcatcgaacgcatcgccaatggcgatcgatctccaattctatcttctcatccgatt
tctgaattcctgactagctctggtacctccgctggtgaacgaaaactgatgccgacgatt
cgagaagagttggatagacgtcaactactttacagtcttctaatgcctgtcatgaacctg
tacatgcctggtttagataagggaaagggactctactttttgtttgtcaagtccgaaaca
aagactcctggtgggttattggccagacccgttttaaccagctactacaaaagcgaccat
ttcaagacccgatcttttgacccgtataacgtctacaccagccccaacgaagctattctt
tgccccgactcctttcagagcatgtactcacagatgttgtgcggcctttacgagcgtcaa
caagtcctccgccttggtgccatcttcgcctccggtctcctccgtgccatccgctttctc
cagctcaattggcgggtactcgcccatgatatccgaactggaacactcaacgccaaaatt
ttcgattccgatatccggcgatgcatgacacaggtgttaagatctgacccggaactcgcc
gattttatcgaatccgaatgctccaaagacaactgggaaagaattattacgcgaatttgg
cccaacaccaagtatttagaggtgatcgttaccggcgccatggctcaatacattccgacg
ctcgattattacagcggcgggttacccaaagtttgcaccatgtatgcttcatccgagtgt
tatttcggactcaatctgaaccccatgtgtaaaccgtcggaagtttcatacaccatcatg
ccaaacatggcgtacttcgagttcctcccacacgacccaaattctcaaagtggcgccacc
ggtgacaaactggtggatcttgtaaacgtacaagtcggaaaagaatacgaactggtgatc
accacttacgccggtctatgccggtaccgtgtcggcgacatcctccgagtcaccggattc
cacaactccgctccacagttccatttcgtgagacgaaaaaacgtattgctgagcatcgac
tccgataaaaccgacgaggcggagttacagaccgccgtcgacaatgcatcaaaattgttg
aacgaattcaacacgagcgtggtggaatacacaagttacgcagatacgaaaacaatccca
ggtcattacgtgatatactgggaattattagtcaaagattcagccaattttccaagagac
gatgtgctggaagggtgctgtttagccatggaagaatcgatgaactccgtgtaccgacag
ggtcgggttgaatgcaattcaatcggggcgttggagatccgagtagtgaaaaacggtacg
tttgaggaattgatggattatgcgatctcgagaggggcatcaatcaaccagtacaaggtg
ccacggtgcgtaaactttacaccaatcatggaactgcttgactccagagtggtatcatcg
catttcagtcaaagcctgcctcattggactcccgaacgacgtcgttga
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