Cynara cardunculus var. scolymus (artichoke): 112516895
Help
Entry
112516895 CDS
T05604
Name
(RefSeq) oligouridylate-binding protein 1-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccav03019
]
112516895
03041 Spliceosome [BR:
ccav03041
]
112516895
Messenger RNA biogenesis [BR:
ccav03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
112516895
Spliceosome [BR:
ccav03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
112516895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_7
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
112516895
NCBI-ProteinID:
XP_024979911
LinkDB
All DBs
Position
LG 8:complement(641771..649359)
Genome browser
AA seq
421 aa
AA seq
DB search
MQQQQQQQQRIRQQQALMQQSLYHPGLLASPQIEPILSGNLPPGFDSTTCRSVYVGNIHP
QVTEILLQEIFSSTGALEGCKLIRKEKSSYGFVDYFDRRCAALAIVTLNGRHVFGQPIKV
NWAYASSQREDTSGHFNIFVGDLSPEVTDATLFSCFSVYSTCSDARVMWDQKTGRSRGFG
FVSFRSQQEAQSAINDMNGKWLGSRQIRCNWAAKGAGTDDKQSSDSKSVVELTNGTSDDG
QEKTSEDAPGNNPQYTTVYVGNLAPEVTSVDLHRHFHALGAGVIEDVRIQRDKGFGFIRY
SSHAEAARAIQFGNARVLFGKPLKCSWGSKPTPPGTSSSPLPPPVATNAHANANVGGFSA
AELAAYERQVALSKMGGVQALMHQQAQRMGMGMGMGMGASQAVYDGGYSGIAGAQPPLYY
Q
NT seq
1266 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagcagcagcagcagcaacagaggataaggcaacaacaagcattgatgcagcaa
tccctttatcacccaggcctcttagcctctccccagatagagccgatcttgagtggaaat
ttgcctcctggatttgattcaactacatgccgtagtgtgtatgttggaaacatccaccca
caggttacagaaatactacttcaagagattttctctagcactggtgctctggaaggatgc
aaacttattcggaaagagaagtcatcttatggttttgtggactactttgatcggcgttgt
gctgctcttgctattgtaactctaaatggaagacatgtgtttggtcagcctatcaaagtt
aattgggcatatgccagtagtcaaagagaagacacatcaggccacttcaacatatttgta
ggtgaccttagcccggaagtcactgatgctacattgttttcttgcttctctgtatactct
acttgctctgatgcaagagttatgtgggatcagaagacagggcgctccaggggatttggt
ttcgtttcgtttcggagtcagcaggaggctcaaagtgcaatcaatgatatgaatgggaaa
tggcttggaagcaggcaaattcgttgcaactgggctgcgaagggtgctggaacagatgac
aaacaaagttcagattctaaaagtgttgttgaactgacgaatggaacatcagatgatggt
caagaaaagactagtgaagatgctccaggaaacaatcctcaatatacaactgtttatgtt
ggcaatttggccccggaggttacatcagttgatctccaccgccatttccatgctcttggt
gctggtgttattgaagatgttcggatacaaagagacaaaggctttggtttcataagatat
agctcccatgctgaggccgctcgagctattcagtttggaaatgccagggttctgtttggc
aagccactcaagtgttcatggggtagcaaacccacacctccaggaaccagttcgagccct
ttgcccccaccagtggctacaaatgcacatgctaatgcaaatgtaggtggtttttcagca
gcggagcttgcagcgtatgaaagacaagtggctctgagtaaaatgggtggtgttcaagct
ctgatgcatcagcaggcccagcggatgggtatgggaatgggaatggggatgggtgctagc
caggcagtctatgatggtggttactcgggtattgctggtgcgcagccccctttgtactac
cagtaa
DBGET
integrated database retrieval system
