Cynara cardunculus var. scolymus (artichoke): 112516899
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Entry
112516899 CDS
T05604
Name
(RefSeq) probable solanesyl-diphosphate synthase 3, chloroplastic
KO
K05356
all-trans-nonaprenyl-diphosphate synthase [EC:
2.5.1.84
2.5.1.85
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00900
Terpenoid backbone biosynthesis
ccav01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
112516899
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ccav01006
]
112516899
Enzymes [BR:
ccav01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.84 all-trans-nonaprenyl diphosphate synthase [geranyl-diphosphate specific]
112516899
2.5.1.85 all-trans-nonaprenyl diphosphate synthase [geranylgeranyl-diphosphate specific]
112516899
Prenyltransferases [BR:
ccav01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
112516899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
HEPPP_synt_1
Motif
Other DBs
NCBI-GeneID:
112516899
NCBI-ProteinID:
XP_024979914
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All DBs
Position
LG 8:23047356..23051460
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AA seq
415 aa
AA seq
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MMPATCHNLEFGRTSFVDFSACGCSFSSSFPSRNYARKVIRSANRGAGKVISCRRDDNIA
KCRVFSTEAPETLLNGTPPTLSGKKESRSLNSPSDLFEVVSDDLLTLNKNLQSIVGAENP
VLMSAAEQIFSAGGKRMRPALVFLVSRATLVLAGLEELTREHRRLAEIIEMIHTASLIHD
DVLDESDMRRGQETVHQIYGTRVAVLAGDFMFAQSSWYLANLENLEVIKLISQVIKDFAS
GEIKQASSLFDCDVELDEYLIKSYYKTASLIAASTKGAAIFSGVGKDVCEQMYQYGKNLG
LSFQVVDDILDFTQSAEQLGKPAGSDLAKGNLTAPVIFALEKESKLREIIESEFCETGSL
DEAIELVMASGGIERAQMLAKQKADAAIQCLNCLPQGAFRLALEGMVKFNLERID
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgatgccggcgacatgccataatcttgagtttggtcgaactagttttgttgatttcagt
gcttgtgggtgttcttttagttcttcatttccttcaagaaattatgcaagaaaagtgatt
aggagtgcaaataggggtgccggaaaagtgatatcttgccgccgggatgataatattgca
aagtgtagagtgttttccactgaagctcctgagactttgcttaatggtactccaccaaca
ttaagtgggaagaaagaatcaaggagcctgaattctccatcagatttgtttgaagttgtt
tctgatgatcttttaacattgaacaagaatctacaatctatcgttggcgcagaaaatccg
gtcttaatgtcggcagctgaacagatatttagtgctggtgggaagagaatgagacccgcc
ttggttttcttagtgtcaagagccacattggtgcttgccggtttagaggaactcacaaga
gaacataggcgtttggcggagatcattgaaatgattcatactgcaagcttaatacacgat
gacgtgttggatgaaagtgacatgagaagaggccaagaaaccgtccatcagatatacggt
acacgagtggctgttctagctggtgattttatgttcgcacaatcgtcatggtacctggcg
aatcttgaaaatctggaggtcataaagcttattagccaggttatcaaagattttgcaagc
ggtgaaataaagcaggcgtcaagtttgttcgattgtgatgttgaactcgatgaatatttg
atcaagagctactacaaaaccgcctcgttgattgccgctagtacgaaaggcgcagcgatc
tttagtggggtcggcaaggatgtctgcgagcagatgtatcaatatggcaagaacctgggc
ctgtcgttccaagtcgtggacgacatcttggatttcacacaatcggctgagcaactggga
aagccagctggcagcgacctggcgaaaggaaacctaaccgcgcccgtgattttcgctctc
gaaaaagagtcgaaactgcgagagatcatcgagtcggagttttgtgaaacggggtctctt
gatgaagctattgaactggtgatggctagtggtgggatagaaagggctcagatgctagcc
aaacagaaagctgatgctgcaatccagtgtctcaattgcttgcctcagggtgcgtttcgg
ctagcccttgaggggatggttaagttcaaccttgagcgtattgactaa
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