Cynara cardunculus var. scolymus (artichoke): 112516965
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Entry
112516965 CDS
T05604
Name
(RefSeq) upstream activation factor subunit spp27-like isoform X1
KO
K15223
upstream activation factor subunit UAF30
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccav03021
]
112516965
Transcription machinery [BR:
ccav03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
112516965
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SWIB
DEK_C
CCDC106
DUF6465
Motif
Other DBs
NCBI-GeneID:
112516965
NCBI-ProteinID:
XP_024980006
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All DBs
Position
LG 8:complement(21601895..21607644)
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AA seq
323 aa
AA seq
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MLTDSDLLKRLHDVLGTSDLDTATAATVRRRIEQDLGIDLSDRKPYIRQQIDLYLQSHYT
NDKPEAEESEDAKVEESDNDGSVSQEEDEHQEEEDSDAEKIKIDSKHKKTPANAKKRGGG
FSKPCALSPQLQKFVGEPEMARTEVVKKIWAYIKEKDLQNPQNRRKILCDEMLHEIFRVK
SIDMFQMNKALTKHIWPIEEEDVVSSEAAASVKPTEKNKQNKRGKEDEPKEKGKRQKAKG
SGFVSPHPISEALVQFFGTGENELSRAEVVKRMWEYIKQNDLQDPSDKRRILCDDKLREL
FKVDTFIGFTVSKLLTAHFIKEE
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgttgacggattccgacttgctcaaacgtctccacgatgtcctgggaacgtccgacctc
gatacagccactgccgccaccgtccgccgtagaatcgagcaagatttgggtattgattta
tcagacaggaaaccctacattagacaacaaatcgatttgtatcttcaatctcactatact
aatgataaacccgaggcagaggaatcggaggatgccaaggtagaagagagtgataatgat
ggaagtgtctctcaagaagaagatgaacaccaagaagaggaagactccgatgccgagaag
ataaagatagacagcaagcacaagaagacgcctgcaaatgcaaagaaaaggggagggggt
tttagcaaaccatgtgcactttctccccaacttcaaaagtttgtcggagagcctgaaatg
gccagaactgaggtggtcaagaagatttgggcttatatcaaagagaaagatttgcaaaat
ccacagaacaggcggaaaatcctatgcgatgaaatgctacatgaaatttttcgtgtcaag
tccattgatatgttccaaatgaataaagcgcttaccaaacatatatggccaatagaagag
gaagatgttgtttcttcagaagctgcagcttcagtcaagcctacagagaagaacaagcag
aataaacgaggcaaagaagatgagccaaaggaaaagggaaagcggcaaaaagcaaagggt
tctggatttgtttctccacatccaatatcagaagcactggtgcaattctttggtacgggt
gaaaatgaattatctcgtgcagaagtcgtgaagagaatgtgggaatatatcaagcagaat
gatcttcaggatccatcggacaaacggaggattttatgtgatgataagctaagggaacta
tttaaagtcgatacattcattgggttcacagtttcaaagcttctgacagctcatttcatc
aaagaagaatga
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