Cynara cardunculus var. scolymus (artichoke): 112517068
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Entry
112517068 CDS
T05604
Name
(RefSeq) probable E3 ubiquitin-protein ligase XERICO
KO
K16285
RING/U-box domain-containing protein [EC:
2.3.2.27
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccav04121
]
112517068
Enzymes [BR:
ccav01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112517068
Ubiquitin system [BR:
ccav04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112517068
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_UBOX
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_5
zf-C3HC4_2
zf-RING_16
zf-ANAPC11
zf_RING_Vps8
zf-C3HC4_3
Prok-RING_1
FANCL_C
zf_RING_Vps8_fungal
Prok-RING_4
zf-Nse
PHD_NSD
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
112517068
NCBI-ProteinID:
XP_024980148
LinkDB
All DBs
Position
LG 8:22615401..22616387
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AA seq
165 aa
AA seq
DB search
MGLSPYSNPCDAGVLCLILVNTAISISMMKEILRPILHLIGIRLASSSSSWSEEDDFSDQ
ASADESIEHRGRPSETYMDEFRSRTPTLRYDSLSCTTKQECSVCLIDFRPDAEINRLSCG
HVFHKSCLEKWLNYWNVTCPLCRNHMMTPKETQENTLSNVSLVET
NT seq
498 nt
NT seq
+upstream
nt +downstream
nt
atgggtctctcaccatactccaacccttgtgatgctggagttctatgtctgattctggtt
aacacagccatctctatatctatgatgaaggaaatccttcgtcccatcctacatctcatc
gggatccgtctcgcatcatcgtcgtcgtcgtggtcggaggaggatgatttttccgatcaa
gcatccgcggacgaatctattgaacaccgcggacgtccgtcggaaacctacatggatgag
ttcagaagccggaccccaacccttcgctacgactccctctcttgcaccacaaaacaagaa
tgttccgtttgcttgatcgatttcagaccagatgcagagattaatcgcctctcctgtgga
cacgttttccataaatcttgcctcgagaaatggttgaactactggaacgtaacctgtcct
ctttgtagaaaccacatgatgaccccaaaagaaacccaagaaaacactttgtccaatgtg
agcttagtagaaacataa
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