Cynara cardunculus var. scolymus (artichoke): 112517120
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Entry
112517120 CDS
T05604
Name
(RefSeq) two-component response regulator ARR12-like
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
112517120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccav03000
]
112517120
Transcription factors [BR:
ccav03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
112517120
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Ortholog
Paralog
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
DNA_pol_phi
Motif
Other DBs
NCBI-GeneID:
112517120
NCBI-ProteinID:
XP_024980218
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All DBs
Position
LG 8
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AA seq
628 aa
AA seq
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MTVEEIRGSVGVSNEIDRFPIGMRVLAVDDDPTCLKLLDGLLRKCQYQVTTTNQAITALK
MLRENRNRFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNSDPKLVMKGITHGACD
YLVKPVRLEELRNIWQHVIRRKVESKSQSKSNNQEKPNQGGEGGQEAGSGDPNGKLNRKR
KDEDEDVEDNGNEDDDPSSQKKPRVVWSIDLHRKFVAAVNQLGIEKAVPKRILDLMNVEG
LTRENVASHLQKYRLYLKRISQQANMVVAFGGSKDASSYMRMSSLDGLGDFRTLSGSGRL
PNAALSSYSPSGMLGRLNSATGVTLHSLTSPSMIQPTHPQNLTNSIGSLTKFQPVVLPTP
PNHQNTNLFQGIPSSFDLGHLHQNGNKPNTTQIPDFNPIDESRIFTGPSSFATLGSQSSL
KMASMSSESFNLVSSSSSYLDVPPPMGENFHDQLPPNSSLKYGYSASSNTIPSFGSNITS
TASVPLEAQGQRHGQYGKPSYSPYSNNAFSTLAAAAAAPPPNGGGLGGPVSQANDQICGV
YNRSNGNGATAMQRSSRETERSSTELKMGSGEEYLLEQTKLPSGFVANNGYDSLDDLMNG
MMKREQDPTIMMDGEFGFDPYSFGSCIQ
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtagaggaaattcgagggtctgttggggttagtaacgaaattgacagatttccc
atagggatgagagttcttgctgttgatgatgatccaacttgcttgaagttattagatggc
cttttgaggaaatgccaatatcaagttacaaccacaaatcaagcaataacagccttgaag
atgttaagggaaaaccgaaaccggtttgatcttgtgatcagtgatgttcatatgccagat
atggatggtttcaagcttcttgaactcgttggtcttgaaatggacttgcctgttatcatg
ttatcaggaaatagcgatccaaagctagtgatgaaggggatcactcatggtgcttgtgat
tatcttgtgaaaccggttcggcttgaggaattacgcaacatttggcaacatgtgatcagg
agaaaagtggagtcgaaatctcaatcgaaatcaaacaaccaagaaaagccgaaccaaggg
ggtgaaggtggacaggaagccggtagcggagatccaaatgggaaactgaacaggaaaaga
aaagacgaagatgaagatgttgaagacaacgggaatgaagatgatgatccctcgtcacag
aagaagccacgagttgtttggtccattgatcttcatagaaaattcgttgctgctgttaat
caacttgggatcgagaaagccgttcccaaaaggattcttgatttgatgaacgtcgaaggt
cttactagggagaatgtggcaagccatctccagaaatatcggctttacttgaaaagaatc
agtcagcaagcgaacatggtggttgcatttggtggcagcaaagatgcttcttcttatatg
cgaatgagttctcttgatggactcggagatttccgaacgttatcgggttccggaagactg
ccgaacgcagcattatcgtcttattcaccttccggtatgctaggtaggctcaacagtgca
accggggtgaccctccatagcctcacttccccttcaatgatccaaccgacccaccctcaa
aacttgaccaattcgattggttcgctcaccaagttccagccggttgtgttaccaacacca
ccaaatcaccaaaacacgaatctttttcaggggattccgtcgtcgtttgatcttggtcat
cttcaccagaatggtaataaaccgaacaccacccagatcccggatttcaatcccattgat
gaatcacgaatctttacgggtcctagtagctttgcgactttggggagccaatcttctcta
aagatggcttctatgagctcagaatcttttaatcttgtttctagcagttctagttatctt
gatgtcccaccgccaatgggcgagaattttcacgaccaattgccgccgaatagcagcctg
aaatatggttactctgcctctagtaacacaattcccagctttggttctaatatcactagc
accgcctcggttcctcttgaagctcaaggccaaaggcatggacagtatggtaaaccaagt
tatagcccctactcaaataacgcttttagcacgttagcggctgcagcagcggcaccacca
ccaaatggtggtggtttgggtggaccagtgagtcaagcaaatgaccagatttgtggggtc
tacaataggtcgaatggcaatggtgcaacggctatgcagcgtagcagcagagagactgag
aggtcgagtacagaactgaaaatgggatctggtgaagagtatctactggagcagacgaag
ttaccaagcggttttgtggcaaacaacggttatgactcgttggatgatcttatgaatgga
atgatgaaacgggagcaggacccgacaatcatgatggatggagaattcggattcgatcct
tattccttcgggtcgtgtatacagtaa
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