Cynara cardunculus var. scolymus (artichoke): 112517129
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Entry
112517129 CDS
T05604
Name
(RefSeq) long chain base biosynthesis protein 1-like isoform X1
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00600
Sphingolipid metabolism
ccav01100
Metabolic pathways
ccav04382
Cornified envelope formation
Module
ccav_M00094
Ceramide biosynthesis
ccav_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
112517129
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
112517129
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ccav01007
]
112517129
Enzymes [BR:
ccav01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
112517129
Amino acid related enzymes [BR:
ccav01007
]
Aminotransferase (transaminase)
Class II
112517129
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
OKR_DC_1
Cys_Met_Meta_PP
Aminotran_5
Tcf25
Motif
Other DBs
NCBI-GeneID:
112517129
NCBI-ProteinID:
XP_024980231
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Position
LG 8:complement(4107450..4112166)
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AA seq
489 aa
AA seq
DB search
MELSNNITTTFMNYMKNASDWVTFAYDAPFARAVLFGVPIGGHLFVEGLLLVVILFLLSQ
KSYKPPKRPLTNKEIDELCDEWVPESLIPPIKEEMEKEAPVLESAAGPHTTINGIDVVNF
ASANYLGLMGHEKLLESCISALEKYGVGSCGPRGFYGTIDVHLDCEARIARFLGTPDSIL
YSYGLSTMFSAIPAFCKKGDIVIVDEGVHWGIQNGLYLSRSTIVYFKHNNMESLRSTLEK
VTQDNKRAKKLRRYIVVESVYQNSGQIAPLDEIIRLKEKYRFRVLLDESNSFGVLGKSGR
GLTEHYNVPIDKVDIVTAAMGHALASEGGFCTGSNRVVDHQRLSSSGYVFSASLPPYLAS
AAITAIDVIEENPQLLTKLRDNVKTLCTGLLGIQGLEIASDILSPIVFLILKKSTGSLKN
DLQLLQDIADRVLKEHSVFVAPSKRSTLDKCNLPVGIRLFVSAAHTESDLQEAYESLKSV
AASILTGQN
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggagttgtcaaacaacattactacaaccttcatgaattacatgaaaaatgcgtctgat
tgggtgacatttgcatatgatgccccttttgctcgagctgttttgtttggagttcccatt
ggaggtcatctgtttgtggaaggtctactcctggtagttattctcttcttactgtctcaa
aagagttataagccacctaagcgccctttaacaaataaggaaatagacgagctatgtgat
gaatgggtaccggagtctcttatcccacctataaaggaagagatggaaaaggaagctcca
gtattggagagtgctgcaggaccacatacaacaattaatggcatagacgtggtgaatttt
gcttcagcgaattacctaggattgatgggacatgagaagttacttgaatcatgcatctct
gctctggagaaatatggtgttggttcttgtggccctcgtggattttatggaacaattgat
gttcacctcgactgtgaagccagaatagcacggtttctgggaactcctgattccatactc
tattcgtatggactttcgactatgttcagtgcaattccagcattttgcaagaaaggagat
attgttattgtagatgaaggtgttcactggggcatacagaatggattatatctgtcaaga
agtacgattgtatactttaagcacaacaacatggagtctctgcgaagtaccctagaaaaa
gtcactcaagacaacaagcgagctaagaagttgagacgctacatcgtggttgaatctgtg
taccagaattctggtcaaattgctccactggatgagataatcagactgaaggagaagtac
cggtttcgtgttcttttagatgaaagcaactcttttggtgttcttggcaaatctggtaga
ggtctaactgaacactacaacgttcctatcgataaggtagatatagtaactgctgctatg
ggacatgcattggcctcagaaggtggattttgcactggaagtaatagagttgtcgatcac
caacgcctcagcagctctggttatgtcttctcagcatctctgccaccatacttggcaagt
gctgcaattaccgccattgatgtcatagaggaaaaccctcaacttttaacaaagttaagg
gataatgtcaaaacattatgtacaggattgttgggaatacagggccttgaaattgcaagc
gatatactgtcacctattgtgttccttatactaaagaaatccacaggatccttgaagaat
gatcttcagttgcttcaagatattgctgatcgtgtactgaaagaacattcggttttcgtg
gcaccttctaaaagatcgactcttgacaaatgcaatctgcctgttgggatcagattgttt
gtttcagctgctcacacagaatctgatctgcaagaagcttatgaatcgctgaagagcgtt
gcagcctcaatattgacaggtcaaaactga
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