Cynara cardunculus var. scolymus (artichoke): 112517179
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Entry
112517179 CDS
T05604
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC2A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112517179
04121 Ubiquitin system [BR:
ccav04121
]
112517179
Enzymes [BR:
ccav01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112517179
Membrane trafficking [BR:
ccav04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
112517179
Ubiquitin system [BR:
ccav04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112517179
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
VPS18_RING_C
zf-HC5HC2H_2
zf-RING_16
Zn_ribbon_8
Rad50_zn_hook
zf-C3HC4_3
Anti-TRAP
Motif
Other DBs
NCBI-GeneID:
112517179
NCBI-ProteinID:
XP_024980301
LinkDB
All DBs
Position
LG 1
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AA seq
406 aa
AA seq
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MSTVGSSSSSYWCYRCNRFIRVQTHLEDSSLTCPDCNGGFIEEIDSPNRLNGSVISSRFP
AAAMYMVGNGQQSPGPSPSPPLLRRARRNAGERSPFNPVIVLRGPTNNGSSVEESGGGNE
EAGTGGGFELYYDDGAGSGLRPLPASMSEFLLGSGFDRLLDQLAQMEGNGFGRIDNNPPA
SKAAIEAMPTIEIQENHVSTESHCAVCKEPFELGTEAKEMPCQHLYHSDCILPWLALRNS
CPVCRHELPSENTDSGDLNRGPNEANNQSATEEEAVGLTIWRLPGGGFAVGRFSGGRRGG
ERELPVVFTEMDGGFNNNGAPRRISWASRGNVARERHGLRRVVRSLFSCLGGGCLGNGRR
ALASSSSSSSDDRASHRSRSLSSTVSNSSRRQRTALFDAHNEPRRW
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacggttgggtcttcatcatcgtcgtactggtgctacagatgcaaccgattcatt
agggttcagacccatctggaagattcatctttaacttgtcccgattgcaacggaggcttc
atagaggagattgatagtcccaacagactaaatggatccgtgattagcagtcggtttcct
gctgcggccatgtacatggttggaaacggccaacagagccccggaccgagtcccagcccg
ccgttgctccggcgtgctagaaggaatgccggcgaacggtctccgtttaacccggtcatc
gttctccggggacccacaaacaatgggagctcagttgaagaatctggtggtggtaacgag
gaagccggcaccggtggtgggtttgagttgtattacgatgatggagctgggtcgggtcta
agaccattgccggcaagtatgtcggagtttttgttgggctcgggttttgatcggttatta
gatcaattggctcaaatggaaggcaatggatttgggagaatcgacaataatccacctgca
tcaaaggcggcaattgaagcaatgccaactattgaaattcaagaaaatcatgtttcaaca
gaatcacattgtgctgtgtgtaaagaaccattcgagttgggaactgaagctaaagaaatg
ccttgccaacatctataccattctgattgcatcctgccatggttagctttacgcaattcg
tgccctgtctgccgccatgaattgccatcagaaaacacagattcaggggatctaaacaga
ggtcccaatgaggcaaacaaccaatctgccaccgaagaagaagctgtggggctaacgatt
tggcggcttcctggcggtgggtttgccgtggggagattttctggcggaagaagagggggc
gagagagaattaccagtggttttcacagaaatggatggtgggttcaacaacaatggagct
ccaagaaggatttcatgggcttcaagagggaatgtggcaagagaacgccatggattaaga
cgtgtggttcgcagtttgttttcttgtctgggaggtggttgtttaggaaatggaagaagg
gctttggcttcgagttctagttctagttctgatgatagagcaagccatagaagtagatct
ttgtcatctacagttagcaactcatcacgcagacaaaggactgctttattcgatgcacat
aacgagcctagaagatggtga
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