Cynara cardunculus var. scolymus (artichoke): 112517204
Help
Entry
112517204 CDS
T05604
Name
(RefSeq) protein NRT1/ PTR FAMILY 1.2-like
KO
K26551
MFS transporter, POT/PTR family, low-affinity nitrate transporter
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccav02000
]
112517204
Transporters [BR:
ccav02000
]
Major facilitator superfamily (MFS)
Nitrate/nitrite transporters
Proton-dependent oligopeptide transporter (POT/PTR) family [TC:
2.A.17
]
112517204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTR2
MFS_1
Motif
Other DBs
NCBI-GeneID:
112517204
NCBI-ProteinID:
XP_024980332
LinkDB
All DBs
Position
LG 8:complement(25087803..25091306)
Genome browser
AA seq
588 aa
AA seq
DB search
MELKMGEQVDEVNQPAHELSTRNHKGGLITMPFIIGNEALEKVGSYGLVPNMILYLMNDY
KIGVAKGTNILFFWSAATNFAPIFGAFLSDSYLGRFSTIALGSLFSLLGTFLLWLTTMVP
QLKPPSCNQSTSTCKPPTNSQFAFLIFAFIFISMGAGGVRPCSLAFGADQIHKKHNPNNK
RALESFFGWYYAAGATAVLIAFTGIVYIQDHAGWKVGFGVPVVFMLLSSILFFVASSLYV
KTKVEKSVFTSFARVIVVAYKNRKIVAGTVDSNRWHYRLKDSNTVPTKRLGFLNKACIVQ
NPKDLTPDGIASDPWSLCTVEQVEELKSLIKVLPIWSTGLMMSINVSQSSFPVIQATTMD
RHLGTSSFQIPAASFAFFTIATLAIWVVLYDSLIIPSASKLVGKPVHLGVKLRMGIGLVI
STIAMVISAIVEHLRRRKAIEEGLVNDPQSVVNMSAMWLVPQYCLHGLAEAFSAIAQNEF
YYSEFPKSMSSTAASLFLVGMAVANLLASGILSTVENLTKTSGQEGWISTNINRGRYDAY
YWVLALMSFGNLFYFVACSWAYGPCTHETVNENDPSDGLENPRSLACR
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggaactgaaaatgggggagcaagttgatgaagtgaatcagccagcacatgagctctca
acaagaaaccacaaaggtggcttaatcacaatgcctttcattataggaaatgaggcattg
gagaaggtggggagctatggattggtgccaaacatgatactgtatttgatgaatgattac
aagattggggtggcaaaaggcacaaacatactctttttctggtcagcagccaccaatttt
gctccaatttttggggcatttctctctgattcatatctgggtcggttcagcaccattgct
ttgggttctctcttttcccttctgggcaccttcctactatggttaacaacaatggttcca
caactaaaaccaccttcttgcaatcaatcaacttcaacctgcaaaccacccacaaattcc
caatttgccttcttgatctttgccttcatattcatctccatgggagcaggtggtgttagg
ccatgttcattagcatttggtgcagaccaaatccacaagaagcataaccccaacaataaa
agggcattggaaagctttttcggttggtattacgccgccggtgccaccgccgtcttgatt
gcgtttacggggatcgtttatatccaagatcatgccggatggaaggtcggttttggggtt
ccggttgttttcatgttgttgtcatccattttgttctttgtagcttcttcgctttatgtc
aagacgaaagtcgagaagagcgtgttcactagcttcgcacgagtgattgttgttgcgtat
aagaaccgtaagatcgttgccgggactgtcgattccaatcggtggcattatcgtcttaag
gattcgaacaccgtccccaccaagagactcgggttcctgaataaagcttgcatcgttcag
aatccgaaagacctcacaccggacggaattgcttcggatccatggagtttatgcaccgtc
gaacaagtcgaggagctaaaatcactaatcaaagttctcccgatttggtcaacgggcctc
atgatgtcgataaatgtaagccaatcatcgtttccggtaatccaagcaacgaccatggat
cgacatctcggcacctcaagcttccaaattcccgcagcctccttcgccttcttcaccatc
gctacgctagcaatttgggtcgttctatacgatagtttaataatcccgtctgcatcaaaa
cttgtcggaaaaccggttcatctcggtgttaaactccgaatgggaatcggtctcgtaatt
tccaccatagccatggtgatttccgccattgttgaacatcttcgaagaagaaaagcgatc
gaagaaggacttgtgaatgatcctcaatccgtcgtaaacatgtcggcaatgtggctagtt
ccgcagtattgcctccatggattagcagaagcttttagcgcgatcgcgcagaacgaattc
tattattcggagttcccgaaaagcatgtcgagcacggcagcttcactgtttttggtcggg
atggcggtggctaacttgttggctagcggtatattaagcacggtggagaatctaaccaaa
acaagcggccaagaagggtggatctcgaccaatatcaatcggggccggtacgatgcttac
tattgggttcttgcgttaatgagtttcggcaatttgttctatttcgttgcgtgtagttgg
gcctatggaccatgtacacatgaaacggtgaacgagaatgacccgagtgacggtttagaa
aacccgagatcgttagcgtgccgatga
DBGET
integrated database retrieval system
