Cynara cardunculus var. scolymus (artichoke): 112517207
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Entry
112517207 CDS
T05604
Name
(RefSeq) dynamin-2A-like
KO
K01528
dynamin 1/3 [EC:
3.6.5.5
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04144
Endocytosis
ccav05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112517207
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
112517207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112517207
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccav04147
]
112517207
Enzymes [BR:
ccav01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.5 dynamin GTPase
112517207
Membrane trafficking [BR:
ccav04131
]
Endocytosis
Clathrin-mediated endocytosis
Dynamin
112517207
Lipid raft mediated endocytosis
Caveolin-mediated endocytosis
112517207
RhoA-dependent endocytosis
112517207
Exosome [BR:
ccav04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112517207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynamin_N
Dynamin_M
GED
PH
MMR_HSR1
PH_8
PH_11
GTP_EFTU
SOS1_NGEF_PH
Nudix_hydro
AIG1
Motif
Other DBs
NCBI-GeneID:
112517207
NCBI-ProteinID:
XP_024980336
LinkDB
All DBs
Position
LG 8:17558081..17605928
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AA seq
908 aa
AA seq
DB search
MEAIEELVQLSDSMRQATAVLNDEDIDENSSSSSKRRSTFLNVVALGNTSAGKSSVLNSL
IGHPALPTGEGGATRAPICIDLKRDGNLSSKSIILQIDSKSQPVSASALRHSLQDKLSKM
SSKSRDEIYLKLKTSTAPPFKLVDLPGVDKGNLDDSLREYAQHNDAILLVVIPASQAPEI
SSARALRIAKEYDRESTRTIGVISKIDQVSSDPKVLAATQALLLGQGPQSTIDIPWVALI
GQSVSIASAKSGSDNSLENSWQAESESLKSILTGAPQSKLGRLALLATLADQIRRRMKIR
LPSLLSGLQGKSQSVQDELVRLGESMVSSSEGTRALALELCREFEDKFLQHIITGEGSGW
KVVASFEGNFPNRIKQIPLDRHFDINNVKRIVVEADGYQPYLISPEKGLRSLIKGVLELA
KEPSLLCADEVHRVLVDIVSSSANATHSLGRYPLFKREVVALATAALEGFKNEARIMVAA
LVDMERVFVPPQHFIRLVQRRMDRQRREEEIKTKSSKKTVDAEQSLLNRASSPQTGRKES
GWTLKLMKDTKQGKDVQEGPALKTAGPEGEITAGFLLKKSAKTNGWSRRWFVLNEKTGKL
GYTKKQEERHFRGVITLEECNVEELEEEPPLNSSKKPKAEERAPSLVFKITSKVAYKTVL
KAHSAVVLKAETAADKAEWLNKLKVIIRAKGGQVIMKADGPPIRQSLSDGSLDTMTRKPA
DPEEELRWMAQEVRGYCEAVLNSLAANVPKAIVLCQVEKAKEDMLNKLYISVSSQSTLRI
EELLQEDGNVKRKRDKVQRQSSLLSKLTKQLSVHDNGAAAALSMSNGNPAESPRSNGSSS
GDDWRSAFDSAANGSSGLDSRYGFSGHNRRYSDPSQNGDAGSGSGSNSSSRHTPNRMPPA
PPGSGYRF
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgatcgaagaattggttcaactttcggattctatgcggcaggctacggctgtg
cttaacgacgaagatattgatgaaaactcatcgtcatcgtcaaaacgccgttccacattt
ctaaacgttgttgctcttggcaatactagtgcaggtaaatcatcagtattgaacagtttg
attggacatcctgctctgcctactggtgaaggtggtgcaactcgtgcacctatatgcata
gacttaaagagggatggtaacttaagcagcaaatcaattatattgcaaattgatagtaaa
tctcagcctgtgtctgcaagtgctcttcggcattctttacaggataaacttagtaaaatg
tcaagcaagagtcgtgatgaaatatatttgaaacttaaaacgagtacagctcctcctttc
aaattggttgatttgcctggagtggataaaggaaatcttgatgattcgttgagggaatat
gctcaacacaatgatgcaattcttcttgttgttataccagcttctcaggcaccggaaatt
tcctctgctagagccctcagaattgcaaaggaatatgatagagaatctacaagaactatt
ggcgtcatcagtaaaatagatcaagtgtcatcagatccaaaagttcttgctgccactcaa
gcacttctcttgggtcaaggaccacaaagtacaattgatatcccgtgggttgctctaatt
ggtcaatcagtttccatcgcttcagcaaaatcgggatctgataactcattagaaaattca
tggcaagctgaaagtgaaagtttaaaatctatattgacaggtgctcctcagagtaagctt
ggtagattagccttgttagcaacccttgctgatcaaatccgtaggcgaatgaagatcagg
cttccaagtcttctatcagggcttcaaggtaagtctcaaagtgtgcaggatgagttggta
aggcttggagaatcaatggtcagtagttctgaaggtacaagggccttggctttggagctt
tgccgtgaatttgaggacaagtttcttcaacatattataactggggagggtagtggctgg
aaagtagttgcaagtttcgaggggaactttcctaataggatcaagcagattccactagat
agacatttcgacataaataacgttaagaggattgtggtagaagcagatggttaccaacct
tatcttatctctccagaaaaagggctccgctctttaataaaaggtgtattagaacttgct
aaagaaccatcactcctttgcgctgatgaggttcatcgtgtgcttgtggatatagtttca
tcatcagcaaatgctacacatagtctaggaagatatcctctattcaagagagaggttgtg
gctttagctaccgctgctctagaggggttcaagaacgaagctaggatcatggtggctgca
cttgttgacatggagcgggtgtttgtcccaccccaacacttcattcgtctggtgcagaga
aggatggataggcagagacgggaggaagagattaaaacaaaatcttccaagaagactgtt
gatgccgagcaatccttgctaaatagggcaagtagtcctcaaacaggaaggaaagaatct
gggtggaccttaaagttgatgaaggatacaaaacaaggcaaggatgtacaagaggggccg
gccttaaagactgcaggacctgaaggggagataacggcaggattcttgttgaagaaaagt
gcaaaaactaatggatggagtaggagatggtttgttttaaatgagaaaaccggaaagctt
ggatacaccaaaaaacaagaagagagacatttccgtggcgtcatcactttagaggaatgt
aatgtagaagaacttgaagaagaacccccacttaacagttctaagaagccaaaggctgaa
gaaagagcacccagcctagtgttcaagataacaagcaaggttgcatataagacggtgtta
aaagctcatagcgctgttgtgttgaaggctgagactgctgccgataaagctgagtggtta
aacaaattgaaagttataatccgtgccaaagggggtcaagttattatgaaagcagatggt
cctcccattcggcaaagtctatccgatggttcgcttgacacaatgactagaaagcctgca
gatccagaggaagaacttcgttggatggctcaggaagtacgtggttattgtgaagctgtt
ctgaacagccttgcagcaaatgttccaaaggcaattgttctttgccaagtagaaaaagct
aaagaagacatgctgaataagctgtacatttctgtaagttcgcagagtacgttgaggatt
gaagagctgcttcaagaggatggtaatgtcaagcgtaaaagagacaaagttcagaggcaa
tcctctctgttatccaaactcaccaagcagctcagcgttcatgataacggagcagctgca
gctttaagcatgtcaaatggtaaccctgcagaaagtccaagaagtaatggatcctcatcc
ggtgatgactggagatctgcattcgattctgctgccaacggcagctcagggcttgactcc
aggtatgggttcagtggccataatcgcaggtatagcgacccttcccaaaacggtgatgct
ggctcaggttcaggatcaaactccagcagccgccacacacctaacagaatgccacctgca
ccacctggttccggatatagattttag
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