Cynara cardunculus var. scolymus (artichoke): 112517211
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Entry
112517211 CDS
T05604
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03015
mRNA surveillance pathway
ccav04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112517211
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
112517211
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccav01009
]
112517211
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccav03019
]
112517211
03036 Chromosome and associated proteins [BR:
ccav03036
]
112517211
Protein phosphatases and associated proteins [BR:
ccav01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
112517211
Messenger RNA biogenesis [BR:
ccav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
112517211
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
112517211
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Sec7-like_HUS
Motif
Other DBs
NCBI-GeneID:
112517211
NCBI-ProteinID:
XP_024980341
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All DBs
Position
LG 8:3186662..3189966
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AA seq
524 aa
AA seq
DB search
MSIFVPESPGLLLAANSTIPTMLKQILAKLPRKSSKSNPTYSDGSNAATDSGNNGSFTNT
CNVISSRLNVVKKMSSSIFPTSGGEMIQPHIPFKDVQSSDKPRLLISKLNLCSNVYDFDD
QDKDNAEKDLKRQVLVEILDFIVSESTKLAEPAMSAICKMCGDNLFREFPPKNSARSPRG
ETEDEDPWFDPAWSHLQLVYEILLRFVSLSSLDPKIAKQFIDHSFLSRLLNLFDSEDPRE
RECLKSVLHRIYGKFMVHRPFIRTAVSNIIYRFVFETEKHNGIAELLEIFGSVISGFALP
LKKEHKTFLSRALIPLHKPKSVGMYHHQLTYCIVQFIEKEPKLTSVVINGLLKYWPVTSS
QKQLMFLSELEELLELIRSDEFEKVMVPLFQRISCCLDSYHFQVAERAHFLWNNEHIHHL
IMCNRQVIMPIVFSSLQRNSKNHWNRTVFNLTQNVMKMFHEVDEPLVVSCQGKFEEDTSA
TAAVVERRRLTWEQLEKVAGGGGFEPVSVLEKPAVAATACVVSC
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgtccatttttgtcccagaaagcccaggtttgttattggctgcgaattcgactattcct
actatgcttaagcaaatccttgcgaaactccctcggaaatcatcgaaatcgaatccgacg
tattcagacggtagcaatgctgctactgattcgggcaacaatggcagcttcaccaacacc
tgtaacgttatttcaagtcgattgaatgttgttaaaaagatgtcgtcttcgatctttccg
acatccggtggcgagatgatccagcctcatataccgtttaaggatgtgcagagctccgat
aagccgaggcttcttatcagtaagttgaatctttgctctaacgtatacgatttcgatgat
caagataaagataacgccgaaaaagatctaaaacgccaggttttagtcgagattcttgat
tttattgtgtccgaatccacaaaactcgcggagccggccatgtcggctatctgtaagatg
tgtggcgataatctttttcgagagttccctccgaaaaactcggctcgttcgcctcgcggc
gagacggaagatgaagatccgtggttcgatccggcgtggtctcatttacaactcgtttat
gaaatcctcctacgatttgttagtcttagctctctcgatccaaagatcgctaaacagttc
atcgatcactcgttcttgtcgaggttactcaatctctttgattccgaggacccacgagaa
cgcgagtgtttgaagtcggttttacaccggatttacggcaaattcatggtccacaggccg
tttatacgaacggctgtcagcaatatcatctacagatttgttttcgaaaccgaaaaacac
aacggcattgcggaactactggagattttcgggagcgtgattagcggatttgcattgccg
ttgaagaaagaacacaagacgttcttgtcacgggctctgattccactgcataaaccaaaa
tccgtgggaatgtatcatcatcaactaacgtattgcatcgttcagttcatcgagaaagaa
cccaaactaacgagcgtcgtgattaacgggctgctgaaatattggcccgtaaccagtagt
cagaagcagttgatgttcttgagcgagctggaagagctgctcgagctcattcgtagcgat
gagttcgagaaggttatggttccgttatttcaacgtataagttgctgtctcgatagctac
cattttcaggtggccgagcgagcgcacttcttatggaacaatgaacacatacaccatctt
ataatgtgtaaccgacaagtgatcatgcctatcgtcttctcgtctttacaacgcaactcc
aagaaccattggaaccgcactgtgttcaacctaacgcaaaatgtcatgaagatgtttcac
gaggtagacgagccgttggtggtttcatgccaaggcaagttcgaggaggacacatccgcc
accgccgcagtggttgagaggcggcgcttgacatgggagcaacttgagaaggttgccggt
ggcggtggtttcgaaccggtttcggttctagagaaacccgccgtcgccgccaccgcttgt
gtcgtctcgtgctag
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