Cynara cardunculus var. scolymus (artichoke): 112517237
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Entry
112517237 CDS
T05604
Name
(RefSeq) heat stress transcription factor C-1-like
KO
K09419
heat shock transcription factor, other eukaryote
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccav03000
]
112517237
Transcription factors [BR:
ccav03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
112517237
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HSF_DNA-bind
Ax_dynein_light
Motif
Other DBs
NCBI-GeneID:
112517237
NCBI-ProteinID:
XP_024980374
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Position
LG_8
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AA seq
311 aa
AA seq
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MESNDIIAPFVLKTYQMVNDPSLDGFIRWGIADNSFIVVQPLDFSQRLLPAYFKHNNFSS
FIRQLNTYGFRKVDPDRWEFASEWFLRGQTHLLKNLGRKKQIHNRNNFMRSEEDDEVEMA
VEIARLNQEQKALERELIGMNKRLEATERRPEQMMALLHKVAEDPEILPRMMLEKDQRSK
RLIHKKRQRILIPPSPLPSPSSRVKNKEDDECRILGGWTASSPEGYYGNEPFWQSSPSPD
TISMAWPRTKAVVGGGGLNMESGPVNGISMYGNYTDGGGGGFNMDYSGGVSPEPDVRPPP
AYPFSLLGGGF
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggagtctaacgacattatcgcacctttcgtcctcaaaacttatcagatggtcaacgat
ccatctctcgacggtttcatccggtggggaatcgccgataacagcttcatcgtcgtccaa
cctctcgatttctcccaacgtcttttacctgcttacttcaaacacaataatttctccagt
tttattcgtcaattaaacacttatggtttcagaaaagtggatcctgatcgatgggaattt
gcgagcgagtggtttttgagaggacaaacgcatttgttgaagaatttagggaggaagaaa
cagattcacaataggaataatttcatgcgatcggaggaagatgatgaagttgagatggcg
gtggagattgcaagattaaatcaggagcagaaggcgttagaacgggagttaatcgggatg
aacaagcggctggaggcgacggagcggcggccggagcaaatgatggcgttattgcataaa
gtggcggaggatcccgagatcttgccacgtatgatgcttgaaaaggatcaacgatcgaaa
cgtttgatacataaaaagcggcaacggattttgattcctccgtcgccgttgccgtcgccg
tcgtcgagggtgaagaacaaggaggatgacgagtgtcggattctcggaggatggacagct
tcttcaccggagggttattatggtaatgagccgttttggcagtcatcgccgtcgccggat
acaatatccatggcatggccgcggaccaaagccgtcgttggcggcggcggtcttaatatg
gaatccggtccggtgaatggaattagtatgtatggaaattatacagatggaggcggcggt
ggattcaatatggattactccggaggagtttcgccggagccggacgttagaccaccgccg
gcttatccattttccctattgggtggcggtttttag
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