Cynara cardunculus var. scolymus (artichoke): 112517346
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Entry
112517346 CDS
T05604
Name
(RefSeq) RNA cytidine acetyltransferase 2-like isoform X1
KO
K14521
N-acetyltransferase 10 [EC:2.3.1.-]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
112517346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccav03009
]
112517346
Ribosome biogenesis [BR:
ccav03009
]
Eukaryotic type
90S particles
Other 90S particles
112517346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GNAT_acetyltr_2
TmcA_N
Helicase_RecD
tRNA_bind_2
AAA_22
DEAD
AAA_19
Motif
Other DBs
NCBI-GeneID:
112517346
NCBI-ProteinID:
XP_024980517
LinkDB
All DBs
Position
LG 1:complement(6619890..6634152)
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AA seq
1049 aa
AA seq
DB search
MRKKVDERIRTLIENGVRTRHRSMFVIIGDKSRDQIVNLHYMLSKSVVKSRPNVLWCYRD
KLELSSHKKKRAKQVKKLMHRGLLDPEKVDPFSLFLETAGITYCQYKDSERVLGNTFGMC
ILQDFEALTPNLLARTIETVEGGGLVILLLRSLSSLTSLYTMVMDVHERFRTESHSLATG
RFNERFLLSLASCESCIVMDDELNILPISSHMKSVTPVPVEEDSEGLSEADRDLKDLKEQ
LKDDFPVGPLIKKCCTLDQGKAVITFLDAILDKTLRSTVALLAGRGRGKSAALGLAVAGA
VAAGYSNIFVTAPSPENLRTLFEFVSKGFDMLEYKEHLDYDIVKSSNPELKKVTIRINIY
KQHRQTIQYIQPHEHGKLSQVELLVVDEAAAIPLPLVKSLLGPYLVFLSSTVNGYEGTGR
SLSLKLLQQLEEQSRASTKSTDAAPSDLEAYPNFQKEHHLQHDSFGRLFRKIDLSEAIRY
ASGDPIESWLNNLLCLDIANSIPSINRLPPPSECDLYYVNRDTLFSYHKDSELFLQRMMA
LYVASHYKNSPNDLQLLADAPAHHLFVLLGPVNESRNQLPDILCVIQVCLEGKISQASAM
RSLSAGHQPSGDQIPWKFCEQFQDKDFPSLSGARIVRIATHPNAMKLGYGSAAIQLLSRY
FEGQFTPISEEDVQNDPESPHLKITEAAEKVSLLEENIKPRSDLPPLLVHLRERQPEKLH
YLGVSFGLTLDLFRFWRKHKFAPFYICEVPNSVTGEHTCMLLKPLDTDDIEVSGSDELGF
FGPYYRAFRSAFARLLCSPKFNTMEYKLAMSILDPKLNFTDVEPSSTISHGIYDDIIKSP
ISMKRLEAYVNHLADHHLISDLKLPLAYLYFQEKFPVTLSYAQASVLLCMGLQNQDASYA
EGVMKLERQQILSLFMKVMKKFQKYLNSVSSKQFSATLPPVKEVELKPHSISVDEDLDEA
AKKVKDDMKAKSDGLLNLDFLQRYAIADKDVDFESALQNGSGKIPSGGVVSVKSSKTKAE
KYGKPKDKSDKKRSKDGQSSKSSKKKRTS
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagaaggtggatgaacgtattagaaccctaattgaaaacggagtcagaaccaga
caccgttccatgttcgttatcatcggcgacaagtcccgcgaccagattgtgaacctccac
tacatgcttagcaaatcagttgttaagtctcgacctaatgttctatggtgttacagggac
aaacttgaacttagcagtcacaagaaaaaacgggccaagcaggtcaagaagctcatgcat
agaggacttctagatcctgagaaggttgatcccttctcacttttccttgaaactgcagga
attacatattgccagtacaaggattctgagagggttcttggaaatacatttggcatgtgt
atactacaggattttgaggccttgaccccaaatcttctagcaagaactatagaaacagtg
gaaggtggtggattggttattctgctgcttcgttctttgtcttcactcactagtctgtac
accatggttatggatgttcatgagagattccgtacagaatctcattctttagccaccgga
cgcttcaatgaacgtttcttactttctcttgcatcatgcgaatcatgtatagttatggat
gatgagttgaatatattgccaatctcatctcatatgaagtcggtcacaccagttccagtg
gaggaggattctgaggggctctcggaagcagatcgtgacttgaaagatctgaaagaacaa
ttaaaagatgattttcctgttggtccactgattaagaagtgttgcacattggaccaggga
aaagctgtcatcacctttcttgatgcgatcttagataagacactccgtagcacagtggct
ttgcttgctggtcgtggccgtggaaagtcagctgcacttggtctcgcagttgctggagct
gttgctgcagggtattcaaatatatttgtgactgctcctagcccagaaaatctaagaact
ttgttcgaatttgtatcaaagggatttgatatgcttgagtacaaggagcacttggattat
gatattgtgaaaagctcaaatccagagctcaaaaaagtgactatcagaataaatatctat
aaacagcacagacagacaattcagtatatacaaccacatgaacatggaaaactgtctcaa
gttgaacttttggtggttgatgaagccgcagctattccgctgccacttgtgaagtccttg
cttgggccttatctggtttttctatcttctactgttaatggctatgaaggtacagggcga
tctctatcgttaaaactgctgcagcaattagaagagcaaagtcgagcatctacaaaaagc
acagatgctgctccttctgatcttgaagcatacccaaatttccaaaaggaacatcattta
cagcatgattcttttggtcggcttttcaggaagatagatttgagtgaagctattagatat
gcatctggtgatccaattgaatcctggcttaacaatttactttgtctggacatcgcaaat
tccatccccagcatcaacaggctacctcctcccagtgagtgtgatctgtattatgttaac
cgggatacacttttctcatatcataaagacagcgagttatttctgcagagaatgatggct
ttatacgttgcttctcactacaaaaattctccgaatgatcttcaattattggctgatgct
ccagctcatcacttgttcgtattacttggtcctgtcaacgagtcaaggaatcagctccca
gatattctttgtgtcatccaggtctgtcttgaaggaaaaatttctcaagcttctgccatg
agaagtttaagtgctggtcatcagccttcaggggaccaaattccatggaaattctgcgaa
caattccaagataaagacttcccaagtctttctggtgctagaattgtgcgcattgcaaca
cacccaaatgcaatgaagcttggatatggttcagctgccatacaattgctgtcaaggtac
tttgagggtcaattcactcccatctctgaagaagatgtccagaatgatccagagtctcca
catcttaaaattactgaagcggctgagaaagtgtccttgcttgaggaaaatataaagcca
aggtcagaccttcctcctctacttgtacatctccgtgaaagacagcctgagaagctacac
tacctgggtgtatcctttgggcttactttggacctatttcgattctggagaaaacataag
tttgctccattttacatatgtgaagttccaaattctgtgaccggcgagcatacgtgtatg
cttctaaaaccactggacactgatgatatcgaagttagcggatcagatgaattgggattt
tttggtccttactatcgagctttcaggtcagcatttgctaggcttttatgttctccaaaa
tttaatacgatggaatacaagcttgcaatgagtatcttggatccaaaacttaactttaca
gacgtagagccttcatcaaccatttcacatggtatatatgacgatatcattaaatctcca
atcagtatgaaaaggctagaagcatatgtgaaccacctggctgatcatcatctgatttca
gatctcaaactcccccttgcatacctatacttccaggagaagttcccagttactttatca
tatgcccaggcctctgtgttattatgcatgggcttgcagaaccaagatgcttcttatgct
gagggagtgatgaagttggaaagacagcaaatattatcattattcatgaaagtcatgaaa
aagttccagaaatatttgaactccgtatcttcgaaacaattcagtgcgaccctcccccca
gtcaaagaagtcgagttaaagccacactcgatttctgtggatgaggatcttgatgaagct
gcaaagaaagtgaaggacgacatgaaagcaaagagcgatggtttgttgaatctggacttt
ctccagaggtacgccattgctgacaaggatgtagatttcgagagtgctttgcaaaacggc
agcggaaagataccctctggtggtgtagttagtgttaagtctagtaaaaccaaagcagaa
aaatacgggaagccaaaagacaagagcgacaagaaaagaagcaaggacggccagtcttcc
aaatcatcaaagaagaaaagaacatcttag
DBGET
integrated database retrieval system
