Cynara cardunculus var. scolymus (artichoke): 112517365
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Entry
112517365 CDS
T05604
Name
(RefSeq) E3 SUMO-protein ligase MMS21
KO
K22756
E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccav04121
]
112517365
03400 DNA repair and recombination proteins [BR:
ccav03400
]
112517365
Ubiquitin system [BR:
ccav04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
112517365
DNA repair and recombination proteins [BR:
ccav03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
112517365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Nse
zf-ANAPC11
BID
zf-RING_UBOX
zf-MIZ
zf-C3HC4_2
zf-C3HC4
CdiI_2
Motif
Other DBs
NCBI-GeneID:
112517365
NCBI-ProteinID:
XP_024980538
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Position
LG 8:22936057..22939609
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AA seq
255 aa
AA seq
DB search
MASTSAPRSETGSSRMKSAASTLCYDNQTLLADIRKAMGTMKEIGVSLEKQHKSQMVKEL
EAEFMELLKAYEDCANLSSAVDSVGNMYRPNEQVTDFKKLLDDEMAKTKRHSSSVPQVNQ
LFRQFREAIWNVHNSGQPMPGEEQEDIVMTSTQSILLNITCPLSGKPVGQLSEPVRSMDC
KHIYEKKVIMEYIRSKHGQPKCPMAACPKKIVAERVVCDPLLRVEIEESCAMNKQTVRPN
VIEDFTEDLEQEDSD
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgacatcagctcctcgaagcgagacaggttcatcgaggatgaaatccgccgct
tccactctttgctacgataaccaaacactccttgctgatattcgaaaagctatgggtacc
atgaaggaaattggggttagtctggagaaacaacacaaaagccaaatggtgaaggagctt
gaagctgagtttatggagttactgaaagcttatgaggattgtgctaatctttcctctgca
gttgattctgttggaaatatgtatcgtcccaatgaacaggttactgattttaagaagctg
ctagacgatgagatggcaaagacaaaacgtcattcatcatctgttccacaagttaatcaa
ttatttcgccagttcagagaagccatctggaatgtgcataattcaggacaacccatgcct
ggtgaagaacaggaagatattgtaatgactagtacacaaagcatccttttaaatattact
tgtccactaagtggcaaaccagttggtcaactctcggaacctgttcgcagtatggactgc
aagcatatatacgaaaaaaaggttatcatggagtacataaggtccaagcatggccaacct
aaatgtccaatggcagcatgcccgaaaaaaattgtggcagaaagagtggtttgtgatccc
ttgttacgcgtcgaaattgaggaatcttgcgcaatgaacaagcaaactgtcaggcctaat
gtcatagaggatttcacagaggatttagaacaagaagattccgactga
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