Cynara cardunculus var. scolymus (artichoke): 112517402
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Entry
112517402 CDS
T05604
Name
(RefSeq) uncharacterized protein LOC112517402
KO
K03538
ribonuclease P protein subunit POP4 [EC:
3.1.26.5
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
112517402
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccav03009
]
112517402
03016 Transfer RNA biogenesis [BR:
ccav03016
]
112517402
03029 Mitochondrial biogenesis [BR:
ccav03029
]
112517402
Enzymes [BR:
ccav01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
112517402
Ribosome biogenesis [BR:
ccav03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
112517402
Transfer RNA biogenesis [BR:
ccav03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
112517402
Mitochondrial biogenesis [BR:
ccav03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
112517402
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_P-MRP_p29
Motif
Other DBs
NCBI-GeneID:
112517402
NCBI-ProteinID:
XP_024980588
LinkDB
All DBs
Position
LG_8
Genome browser
AA seq
298 aa
AA seq
DB search
MGTSIQDPKNRAFEAIARREVYELQLQQKHKHNKRSLEKNTVESSADFKCTNQEVPPSSS
AENIPSKKGKYFFSGQTTTRDADGDHPIYLPLSHPVHENLAMPNHEVNVIDKILHELLQS
GDSAQNYMQGSRRMKMDNRIHLDNKVQECKMSGIALAKALQSHSKRSTKHMSMKQHKKYG
SLDLPQELHNFEIFKPMHEMWKGYIMQLLKSVGKSQMAQCLLGADLHGAVILVSHCKMAA
FTGVSGIMIRETAETFGIITQANKFVVVLKKISVFMFQVDCWKITLHGDKLTSRKIGQ
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgggcacgagcattcaagatccaaagaaccgtgcattcgaggcaatagcgagaagagaa
gtttatgagcttcagttacaacaaaagcacaagcataataagagatctcttgaaaagaac
actgtcgaaagttctgctgattttaagtgtacaaatcaggaagttccaccatcctcatct
gctgaaaatatcccatccaagaaaggcaaatattttttctcagggcaaaccaccacacga
gatgcagatggagatcatcctatatatcttccactctcgcaccccgtgcatgagaatcta
gcaatgccgaatcatgaggtaaatgtgatcgacaagattttgcatgaacttctgcagagt
ggcgattctgcccagaattacatgcagggatctagaagaatgaaaatggacaatcggatc
catcttgataataaagtacaagagtgcaaaatgtctggcattgcacttgcgaaggcttta
cagagccactcaaagagatcaacaaagcacatgtcaatgaaacagcacaagaaatatgga
tcattagatttgcctcaagagctccacaactttgaaattttcaaaccaatgcatgaaatg
tggaaaggctatataatgcaacttctaaagagtgtcgggaaaagtcaaatggctcaatgt
cttcttggtgcagatctacacggtgcagttattctagtttcacattgcaaaatggctgcc
ttcactggagtgagtgggatcatgatccgtgaaactgcagagacatttggaataatcaca
caagctaataaattcgtagttgtattgaagaagatttctgtatttatgttccaagtggat
tgctggaagattacactgcatggagataagctcacttccaggaaaattggccagtga
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