Cynara cardunculus var. scolymus (artichoke): 112517477
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Entry
112517477 CDS
T05604
Name
(RefSeq) uncharacterized protein LOC112517477
KO
K17925
sorting nexin-13
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccav04990
]
112517477
Domain-containing proteins not elsewhere classified [BR:
ccav04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
112517477
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
Motif
Other DBs
NCBI-GeneID:
112517477
NCBI-ProteinID:
XP_024980692
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All DBs
Position
LG 8:21514496..21521666
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AA seq
1021 aa
AA seq
DB search
MKAMETLQDLIEEAKLRTVWWALCIFAVSYFLAHTSKSMWMNVPIAILLVSGSRILLNEV
EFRWKIRKTRPETYLSHLEKKQLSVNDSRLSTLPPPPKWKRKIDSPVVEAAMEDFINKLL
QDFVVDLWYSDITSDKEAPELIRAIIMDVLAEISARVKNINLVDLLTRDVVDLVGVHLEL
FRKNQAAIGVEVMVTLSSEERDERLKHHLMASKELHPAVISPESEYKFLKRIMGAVVAVV
LKPREAQSALVRCIARELLACLVMEPVMRFASPAYINELLELIFIANEGGKEADEDQSAN
SKGHKQDQAVATSSAKRPDLSYSHESDVKLSRHDNEIALPLVKSCNISTGLIQEETKHPA
AADWARILEAATQRRTEVLQPENLENMWTKGRNYKKKALKNAAKGVQSSTSAGVGIDGGI
KQTKGKEISPKKLETSTSVGIPPKPHLDGQRKDHLFDVDQSNASNFDGGGVEEKSIVGGG
SKNIFRKSNSASDLNNQTQIETAYPEVSRSIITEFYSANVGKRDVHNTNAGFDKVLRIEG
YVPKLKCRVLGAYFEKLGSKSFAVYSIAVTAAENNTWFVKRRYRNFERLHRQLKDIPNYT
LHLPPKRIFSSSTEDAFVHQRCIQLDKYLQDLLSIANVAEQHEVWDFLSISSKNYSFGKS
SSVMRTLAVNVDDAVDDIVRQFKGVSDGLMRKVAGPSFTYEPVSSATSRSLTWKADELSN
SFTRQTTSESANSLSDNEDHDKEETIDHDETDSSAPLNGWHSDSELNSKGFPPRVVKHDE
LIRSLDTDKRGVRSEILNLAANFPSTSNRLEDPLGVPAEWTPPNVSVPLLNLVDKIFQLN
RRGWLRRQVFWISKQILQLMMEDAIDDWLLRQIHWLRRDDIVAHGIRWIQDVLWPEGVFF
TRLNAQTQTGSQSDQDSPRTASHPSSSRVNKQGSFEEQLEAARRASDVKKMIFNGAPSTL
VSLIGHNQYKRCAKDVYYFLQSDVCLKQLAYGLLELVIITVFPELHDIITDVHDKKQFPP
V
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgaaggccatggaaactttacaggatctgatcgaagaagcaaagcttcgtactgtgtgg
tgggctctttgtatcttcgctgtctcttacttcttagctcacaccagtaaatcaatgtgg
atgaacgttcctatagctatacttttggtttcgggatcacggattctgttaaacgaagtt
gaattccgttggaagattaggaaaacccggccagagacgtatttgtcacacttggaaaag
aagcagttgtctgtgaatgattcaaggctttccacgttgcctcccccgcctaaatggaag
cggaaaatcgattcaccggtggttgaggctgctatggaggattttattaacaagcttttg
caagactttgttgttgatctgtggtattcagatattacgtcagataaggaggcacctgag
ctgattcgagcgatcattatggacgttcttgctgaaatatccgcaagagtgaagaacatt
aaccttgttgacttgttaacgagggatgtagttgatctagttggggtccacctagagctt
tttagaaagaaccaagctgctatcggtgtggaggttatggtaacattatcgtcagaagaa
agagatgaacggttgaaacatcatctaatggcttctaaggagcttcatcccgctgtgata
tctcccgagagtgagtacaagtttctcaagcggattatgggtgctgttgtggctgtagtc
ctaaaaccacgtgaagctcagtctgctttagttcgttgcattgcccgagagcttttagct
tgtttggttatggaacctgtgatgagatttgcaagtcccgcatatatcaacgagttgctt
gagcttattttcattgctaacgagggagggaaagaggcggatgaagatcaatcggctaat
tctaaaggccataaacaggatcaagccgttgctacaagctctgcaaaaaggcccgatctt
tcttatagtcacgaaagtgatgtgaaactttctaggcatgataacgagatagcacttcct
ttagttaaatcttgtaatatctctactggtttaattcaagaagaaacaaagcatccggct
gctgctgattgggctcgaattcttgaggcagcaacccagagaaggacagaggttcttcag
ccggaaaatcttgaaaatatgtggaccaaaggaagaaactataagaagaaagctctgaag
aatgctgctaaaggagtacagtcttctacatcagccggggttggaatagacggtggaatc
aagcaaactaagggaaaggaaatatcgcccaaaaagctcgagacttcaaccagcgtaggg
atcccaccaaagcctcatttagacggtcaacggaaagaccatctttttgacgttgatcaa
agtaacgcatcgaattttgatggaggaggagttgaagaaaaatctatagttggtggtgga
agtaaaaatatctttagaaaatcaaacagcgcttctgatttgaacaatcaaactcagatt
gaaaccgcatatccagaagtcagccgatcgattatcacagagttttatagtgcaaatgtc
ggcaaacgtgatgtacataatacgaatgctggttttgataaagtattacgcattgaagga
tatgttccgaagcttaagtgtcgggttctaggagcgtactttgagaaacttggttcgaaa
tcgtttgcggtctattcaattgcagtaacagctgctgaaaacaacacttggtttgtaaaa
agaagataccggaattttgagagattgcatcgacaacttaaggacatcccgaactatacg
ttacatttgcctcctaaaagaatattttcgtcaagcacagaggacgcgtttgtacatcag
cgctgcattcagctcgataaatatctgcaggatcttctgtctatagctaacgttgcggag
caacacgaagtatgggactttttgagtatttcttcaaagaattactcgtttgggaagtct
tcttcggtaatgagaaccttagcagtcaatgtggatgacgctgtggacgatatcgtccgt
caattcaaaggcgtttcagatggtttgatgcggaaagttgctggcccatctttcacttat
gaacccgtgtcttcggctacaagcagaagtttaacgtggaaagcagatgaacttagtaat
tccttcacgagacaaactacctcagagtcggctaatagtctttctgataacgaggaccat
gacaaagaggaaacaattgaccatgatgagacggattctagtgcaccacttaacgggtgg
cattctgacagcgagttaaactcgaaaggatttccaccaagggttgtcaagcatgatgaa
cttataagaagcttagatacggacaaaagaggagtgcgatccgaaatactcaatctggct
gcaaattttccttcaacttccaaccgactggaagatccgctcggtgtgccagcagagtgg
acaccacctaacgtgagtgttccgttgctaaatttggtggacaagatatttcaactcaac
cgaagaggctggttaagacgacaggtgttttggatatcaaagcaaattttgcagttaatg
atggaagatgctatcgatgactggctcttacgccaaatacattggctcaggcgagatgac
atcgtggctcacgggatccgttggatccaagatgttttgtggccggaaggtgtgtttttc
acgagattaaatgctcaaactcaaacgggttctcaatctgatcaagattctccgcgaact
gcaagtcatccatctagcagtagggtgaacaaacaagggtcgttcgaggagcaactggag
gctgctcgaagggctagcgatgtcaaaaagatgatctttaacggagcaccttctacattg
gtcagcttgatcggtcataaccaatacaagcgttgtgcaaaagacgtatattattttctc
cagtctgatgtatgtttgaagcaacttgcgtacggattactagaactcgtgatcataaca
gtctttcccgagctgcatgatatcataaccgatgttcacgataagaagcaattcccgccc
gtatag
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