Cynara cardunculus var. scolymus (artichoke): 112517624
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Entry
112517624 CDS
T05604
Name
(RefSeq) trithorax group protein osa-like
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-RING_2
zf-RING_5
zf-C3HC4_2
zf-RING_UBOX
zf_UBZ
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
112517624
NCBI-ProteinID:
XP_024980741
LinkDB
All DBs
Position
LG 9:10332348..10350217
Genome browser
AA seq
1513 aa
AA seq
DB search
MGFDNECIINIQSLAGEYFCPVCRTLVYPHEALQTQCTHLYCKPCLAYVVSSTQACPYDG
YLVTEAGSKPLMESNKALAETIGKTTVHCLYHRSGCMWQGPLSDCTTHCSGCAFGNSPVV
CNRCGIQIVHRQVQEHAQTCNVNGTNTQPQQGSETAQDPAVSGAAVSIDQTKTANQVAAP
ASQPQASHTATAPASAQNPNQPATANPVPQAMPANAVPTPEQWYQQQYQQYYQQYPGYDP
YQQAYQQYYPYQQQPAQQFQQPPLQVQGQAQNQVQAQPQPQPQPLPQPQLQQQMQTPMQL
QPQVQPQPVQPQAQNYPLTQAQGHSQPQPQTHSQAQPQIPSNGQPQPLYPQAVVVGSNQS
QGQVNPPQQAHPGGQPHVPIQSQVQPLARGHMPPQPYSQAQPHPVQNHAQPHMQVPQYQQ
PHPQMHHPQLPQVHPHSQTQSQPQPHPQAHPHFQPHPQPQSQPINAQHPPVQSMGGHPSY
PSQPHQQIQHAPPQQHPMQLQPSTGSLPPGQMPVQFPQPPPHMRPTQPPHMLPSQGQTPG
IPPIQQHIHPHNQPGLPAHQRPAVPPVQQPMPQQYVQQPQVFAGQASGGQPHQAGPFAQQ
HSQVRPQGPPQPMQQPLGFVQPQQGTALPHGMPPHSSQSYGGRPTMLNQGSQSQHFPQSS
GAAGIAPHARPPQFGPSQPSVNQSNVNMTSQPHVYSEQHLNQYMPPLGGAMVDRKGDQTF
ERRAEQQEDKSPSLKKSEPVANDFGPNFNEVKPETGMNDERKPGGGSEDDHRKDEALSKD
AVSELHQVQGVPGDSVTVQRVKVESKDGVVDHSPGGKLSHNKAEDVGVATIDSVKQGEAS
VNFQGSSEVDNGSLSVPPGSSQGPLNGRDHVQQDRTFNQSQTTPQGQFGDVSGGFPSKGT
DHSSHTALTDQGRSPHPPVPYAFSGQQQRPAAPSLLQSAPPTGQTLGQPPSHIRPPGHGY
LPHGPPPGQPEHFQPPGPNQPGPFHPEYPMGGPPVPGSASTLGVAPNNFSNSRGYEAHSA
GSHGQYNQGQIPQSSQARPSRMSQGEPLGPSLSSAPLPHGPDGQTVPRHPGPMENDMYQS
QRPPHFDSRRPDTHFPGNLDRGPYGQPFGVESNSMRMNGAPLQGHDSASAPVYRDEKFRT
PAGMHPDNFSMGPSRHLEQGEFMGALKQFPGPPHLGSEDSPKFANHSSRPLGGYGMDGPS
RFLDKDPHGYGYDAGQRVDPGTGGPPSAFLPPYHSAGGLHPNESGGRPLPASMHDENRGR
FDNSRQNPDYLAPMHGFGRHHMDRLPPGSPGNPSRSFGIPHSIDVDGREMERHPFGERFP
MVPPGHMHRGEFDGPGKLRSGELSQMQRGEPFGLRNLSGHPHVGEPGFGSFQDYGRSGES
NGPGGFSHQQPFGESFGAKSTRPHLGEPGFRSSYSRQGFPSDGGFYAGGSDSFDQLRKRK
SFSMGWCRICKIDCESVEGLDIHGQTREHQRMAMDMVISIKQKSAKKQKTSNDHSAREEA
SKLRNAEIHARVI
NT seq
4542 nt
NT seq
+upstream
nt +downstream
nt
atgggttttgacaatgagtgtataataaacatccaatctcttgctggcgagtacttttgt
cctgtttgtcgaacccttgtgtatccacatgaggcactccagacacagtgtactcatcta
tactgcaaaccttgtctggcatatgttgtaagcagtactcaggcttgcccatatgatgga
tacctggtaaccgaagctggttcaaagccactcatggaatccaacaaggctctggcagaa
accattgggaaaaccactgtacattgcctctatcacaggagcgggtgcatgtggcaaggt
cctttatctgattgcacgactcactgttcgggatgtgcctttggcaattctccagttgta
tgcaaccgatgtggaatacaaattgtgcatcgtcaagtgcaggagcatgctcagacctgt
aatgttaatggtacaaatactcaaccacagcaagggtctgagactgcacaggatcctgca
gtatctggagctgctgtgtccattgatcaaaccaagactgctaatcaagtagcagcacca
gcttcccagccacaggcatctcatactgctaccgcaccggcttctgctcagaatcccaat
cagccagcaacagcaaatcctgttccccaagccatgcctgcaaatgctgttccaacacct
gaacagtggtatcagcaacagtatcagcaatattaccaacagtatcctggatatgatcca
taccagcaggcttatcaacaatactacccgtatcaacagcagcctgctcagcaattccag
cagccacctctacaggtacaggggcaggcacaaaaccaggttcaggcccagcctcagcct
cagcctcagcctctgcctcaaccacaacttcagcagcaaatgcaaacccctatgcaactt
caaccacaagtgcaaccacagccagttcagccccaggcccaaaactatcctctgacacaa
gcccagggccatagtcaaccacaaccccagacacactctcaagcccagccacaaattcca
tccaacggacaacctcaacctctatatcctcaggctgtggtggttggctcaaatcaaagc
cagggtcaagtgaatccaccacagcaagctcacccaggaggtcagccacatgtgccaatt
cagtcacaggtacagccccttgcccgtggccacatgcctccacagccatactcacaagcc
cagccacatccggttcaaaatcatgctcaaccacatatgcaagtgcctcaatatcagcaa
cctcatccacagatgcatcatcctcagcttcctcaggtgcaccctcattctcaaacacaa
tcgcaacctcaacctcacccacaagcgcatccacatttccaaccacatcctcagcctcaa
tcccaacctattaatgctcagcatcctccagtccaatctatgggtggtcatccctcttat
ccctcacagcctcaccagcaaatccagcatgccccaccacagcagcatcctatgcaactg
cagccatcaactgggtctttaccgccaggtcaaatgcctgttcagttcccacaaccacct
cctcatatgcgtcctactcaacctcctcatatgttgccttcacaaggccaaactccagga
atcccacccatacaacaacacatccatcctcataatcagcctggcttaccagctcatcag
cgtcctgctgtgcctccggttcagcaaccaatgcctcagcaatacgtgcagcagcctcaa
gtatttgcaggacaagcatcaggaggtcagccacaccaagctggtccttttgcacagcag
cattctcaggtacgtccacagggtccacctcagccaatgcagcaacctcttggatttgtt
caaccgcagcagggtacggcattgccacatggcatgccacctcattcatctcaaagctac
gggggaagacccactatgttgaatcagggaagtcagtcacagcatttccctcaatcttct
ggtgcagcaggtattgcaccacatgccagaccaccacaatttggcccgagccagccttct
gtaaatcagagtaatgtaaacatgaccagccaaccacatgtatattcagagcagcacctt
aaccaatatatgccacctttgggtggtgcaatggtggacagaaaaggtgatcaaacattt
gaaagaagggctgaacaacaagaagataaatcaccatccctgaagaagtccgagccagtg
gctaatgattttggtcctaatttcaatgaagtaaaacctgaaaccggcatgaatgatgaa
cgtaagcctggaggtgggagtgaagatgaccataggaaagacgaagcattgagcaaggat
gctgtctctgagttgcatcaggtccagggggttccaggtgattctgttactgtgcaaaga
gtgaaagtagagagcaaggatggtgttgtagatcattctcctggtgggaagttgagtcac
aataaagcagaggatgtgggagttgccaccatagactccgtgaaacaaggggaggcaagt
gtgaactttcagggttcttctgaggttgataatggatccctttctgttcctcctggaagt
tctcagggtcctcttaatggtagagatcatgtccaacaggacagaacctttaatcaatcc
caaacaacgcctcaaggtcagtttggtgatgtgtctggtggatttccgagcaagggcact
gaccattcttctcacactgctcttacagatcagggaagatctccacaccctcctgtgcca
tatgctttttctgggcagcaacaaagacctgctgcaccttcattgttacagtccgctcct
cctactggacagacactggggcaacccccaagccatataaggcctcctggacatggttat
ttgcctcatggccctcctccaggacaacctgagcacttccagccacccggaccaaaccaa
cctggtccctttcatcctgagtatccaatgggtggacctcctgttccaggttctgcatct
accttgggagtggctcctaataatttcagtaacagcaggggctatgaagcacattctgct
ggatctcatgggcaatacaatcaaggtcagatccctcagtcttcacaagctaggccttcc
aggatgtctcaaggtgagccattgggaccatcgctcagttctgcacctctgccacatggg
cccgatggccaaactgttccacgtcatcctggtccaatggaaaatgatatgtaccaaagc
cagaggccgcctcattttgacagcagaagacctgatacccatttccctggaaatttagac
cgggggccttacgggcagccttttggtgttgaatcaaattcaatgagaatgaatggcgca
cccctgcaaggtcatgattcggcatcagcacctgtttatcgtgatgaaaaatttagaact
cctgcagggatgcatcctgataatttttccatgggaccatctcgtcaccttgagcaaggt
gagtttatgggagctctcaagcagtttcctggcccccctcacttgggcagcgaggactct
ccaaagttcgcgaatcattcatcaaggccattgggtggatatggaatggatggaccatca
aggtttcttgataaagacccccatggatatggctatgatgctgggcagagggtggatcct
ggcactggaggacctccttcagcatttttgcccccctatcattctgctggtggtttgcat
cccaatgagtctggtggaaggccacttcctgcaagtatgcatgatgagaacagagggagg
ttcgataatagtcgccagaatcctgattatcttgcaccaatgcatggttttggtcgccac
catatggatcgtctaccgcccggtagtccaggaaatccatcacgttcatttggtatccca
cacagcatcgatgttgatggtagagagatggaaaggcatccatttggtgaaagattccca
atggtgcctccgggtcacatgcacagaggagagtttgatggcccaggaaagctgaggagt
ggcgaattgagccaaatgcaaaggggtgaaccttttggcctgaggaatctatctggtcat
cctcatgtgggtgagcctggttttggctccttccaagattatggtcgttcaggggaatca
aatgggcctgggggattctctcatcaacagcctttcggagagtcatttggtgccaagtca
actcgtccacatctgggcgagccagggtttagaagtagttattcgcgtcaagggttccca
agtgatggtggattttatgcaggtgggtctgattcatttgatcagttaaggaaaagaaag
tcgttcagcatgggttggtgtcgcatttgcaaaattgactgtgaaagcgtggaaggcctg
gacatacatggtcagacacgtgagcatcagaggatggctatggatatggttattagcatt
aagcagaagagtgctaagaaacaaaaaacatctaatgaccattctgcacgtgaggaggca
agcaagctgagaaatgctgagattcatgctcgtgtcatatag
DBGET
integrated database retrieval system
