KEGG   Cynara cardunculus var. scolymus (artichoke): 112517633
Entry
112517633         CDS       T05604                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4-like
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ccav04121]
    112517633
Enzymes [BR:ccav01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     112517633
Ubiquitin system [BR:ccav04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    112517633
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_UBOX zf-C3HC4_3 zf-RING_5 zf-rbx1 zf-C3HC4_4 zf-RING_10 Prok-RING_4 TRAF3_RING Rtf2 Zn_ribbon_6 RING_XB3-XBAT31 zf-ANAPC11 zf-Nse zf-RING_4 DZR_2 Sina_RING zf-RING_6
Other DBs
NCBI-GeneID: 112517633
NCBI-ProteinID: XP_024980755
LinkDB
Position
LG 9:16318413..16323669
AA seq 231 aa
MNTQGQVVRYARGGRRRKEVLNVDLNVPPPVENQEQVGGPAVSVAQGGQGGVPAILVAHG
WQGHQPAGSTQPAPIDVEELDDDVIISSPRAFEEAKNKSRRSRRTLVVDVESEGGAVRLG
LNQGNKRRRGSAIPPVINCERYVNLEGSSDSMRGRAHHIVVPPPPPPPPKDPTFSCPVCM
GPLVEEVTTKCGHIFCKACIKAAINTQPKCPTCRRKVTNKDIIRVYLPTTK
NT seq 696 nt   +upstreamnt  +downstreamnt
atgaacactcaggggcaagttgtgaggtatgcaagaggcggtaggcgaaggaaggaagtg
ctaaatgtggatctcaatgttcctcccccagttgaaaaccaggagcaagttggagggcca
gctgtttctgtggctcagggtggacaaggtggggttccggctattctagtagctcatggt
tggcaaggtcatcaaccagcaggatccacacaacctgcaccaattgatgttgaggaattg
gatgatgatgtcattatatcctccccaagggcatttgaagaagctaaaaacaaatcacga
agaagccggagaactttggtggttgatgtggaatctgaaggaggtgctgttaggcttggt
cttaatcaggggaacaagcgaagaagaggttctgcaattccaccagttatcaattgtgag
cgctacgtgaatttagaaggaagcagtgattctatgagagggagagcacatcacattgtt
gtgccaccgccacctccaccaccaccgaaggatccgaccttcagctgtcctgtttgcatg
ggaccgttagttgaggaggtgacgacaaagtgcggtcacattttctgcaaggcatgcatc
aaggctgcaataaatactcagcctaaatgccctacttgtaggcggaaagttactaacaaa
gatattattagggtttatctccctaccaccaaatga

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