Cynara cardunculus var. scolymus (artichoke): 112517646
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Entry
112517646 CDS
T05604
Name
(RefSeq) B3 domain-containing transcription factor ABI3 isoform X1
KO
K09287
RAV-like factor
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccav03000
]
112517646
Transcription factors [BR:
ccav03000
]
Eukaryotic type
Other transcription factors
AP2/ERF
112517646
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3
Motif
Other DBs
NCBI-GeneID:
112517646
NCBI-ProteinID:
XP_024980776
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Position
LG 9:15946594..15951556
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AA seq
770 aa
AA seq
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MYPKEEKDVDDHHRMEGYDHHVIDEQENCKSTGFDALGTTMMTSTDDQRGIWEIDVRAQQ
QNLLHEMNDPSMFYNDQFPQIPDFPCMSSSSSSSSNPAPAKPISSATTTSSASSASASSS
TSSAASWAVLKSEYVTEEEDDQLEELGVDRRKRCHRSEEMPAAVMSTAVVEAVGRPLEMA
DGSGSIDCMDVMENFGYMDLIDGNEIWDPSSIFEQNPPENLQQECLNNSNGSEVVQDGGG
VGGGGRLDELGAVFFEWLKSNKEFISAEDMRNIKLKKSTVECASKRLGSSKEGKKQLLKL
ILEWVQQHQLQRKASGGVEGPAPATAPTPTAAATTTQYPLQHFQGLPSQPPPPTTPPPFH
CNSWVQPNDMNHGFSPTPWIPPPLPYPPYMADQATNGMAMVAAQPSGTFSYMGGGDYNSA
MNCHLNPYNNPGSGEYQVLESAPSWNPSQITMAAASPYNNQFPDVGNNYGPPIMPLPSAY
TDQYPYNPVFAGGGGGGGEQRLMRLGSSATKEARKKRMARQRRTYFHHHHHSRQNQQHNH
PNQVANSDHHPHTMLVDDNCSGKSQGGNWLYWPSTPSATTPAATVLPPPMEAPQRPPSRI
PQTSDRQSKQTSSDKRQGLKTEKNLKFLLQKVLKQSDVGSLGRIVLPKKEAESHLPDLDS
RDGISIAMEDIGTSQVWNMRYSLRFWPNNKSRMYLLENTGDFVKANGLQEGDFIVLYSDV
KCGKYLIRGVKVRQPATGKPEAKKPAKRSYRSTSQSARSSPSSPTKITAI
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgtatcctaaagaagaaaaggatgttgatgatcatcatcgtatggagggttatgatcat
catgttattgatgaacaagaaaactgtaaaagtactggttttgatgcattgggtacgact
atgatgaccagcaccgatgatcaaagagggatctgggagattgatgttagagctcaacag
cagaatcttcttcatgaaatgaatgatccttccatgttttacaatgatcagttccctcaa
attcctgattttccatgcatgtcttcttcgtcgtcttcgtcttcgaatcctgctccggcg
aagccgatatcgtccgcgaccaccacttcttccgcgtcgtcagcgtcggcgtcttcgtcg
acttcctccgctgcgtcttgggcggtgctgaagtcggagtatgttacggaggaggaggat
gatcagttggaggaactcggggttgataggaggaagagatgtcatcggagtgaagagatg
ccggcggcggtgatgtcaacggccgtggtggaagcggttgggcggccgctggagatggcg
gatggaagtgggtcgattgattgcatggatgttatggagaattttggttatatggatctg
attgatggtaatgaaatctgggatccttcttcgattttcgaacaaaacccgccggagaat
ttgcaacaagagtgtttgaataacagcaacggtagtgaggtggtgcaggacggcggcggg
gtcggaggcggagggcggttggatgaactgggggcggtgttcttcgagtggttgaaatcg
aacaaagaattcatatcagcagaagatatgagaaacattaaactcaagaaatcgacggtc
gaatgtgcttcgaaaagattgggatcttctaaagaaggcaaaaagcaactcttgaagtta
attcttgaatgggttcaacaacaccaacttcaaagaaaagcgagcgggggcgtggaagga
cccgcccccgccacagcccccacccccaccgctgccgcaaccaccacccaatacccttta
cagcatttccaaggactcccatctcaaccaccaccgccaacaactccaccacctttccac
tgcaattcttgggttcaacctaatgacatgaaccacggattctctccgacgccatggatc
cctccgccgttgccgtatccgccgtacatggcggatcaggcaacaaacgggatggcgatg
gtggcagcgcaaccatctgggacgttttcttatatgggtggtggtgattacaattccgct
atgaattgccatcttaacccgtataataatccggggtctggtgaatatcaagttctcgaa
tctgcaccgtcatggaatccgtcgcaaatcaccatggcggcagcatctccgtataacaac
caatttcccgatgtgggcaacaattatggtccaccaattatgccgttaccttctgcttac
accgatcagtacccgtataacccggtgttcgcaggaggaggtggtggtggcggagaacag
cggctaatgaggttgggttcgtcggcaactaaagaagctaggaagaaacgaatggccaga
cagcggcggacttacttccaccaccaccaccattccagacagaatcagcaacacaaccat
cccaatcaggtggcaaactccgatcatcacccacacacaatgctcgttgatgacaattgc
tccggcaaatcacagggcggaaactggttgtactggccatccacgccttctgccaccacc
cctgctgccaccgtccttccaccacctatggaagcaccgcagcggccaccctccagaatc
cctcagaccagtgaccgccaatccaaacaaacttcctccgataaacgtcagggattaaag
accgagaaaaatttgaagtttctgctccagaaagtattgaagcaaagcgatgtcggaagt
ctggggaggatcgtgctgccgaagaaagaagccgagagtcacctcccagatctcgattcg
agagacggaatctcgattgccatggaggatatcgggacttctcaagtgtggaacatgcga
tatagcctcaggttttggccaaacaacaaaagccggatgtacctcctcgaaaacacagga
gatttcgtgaaagcaaacgggctccaagagggcgatttcattgtgctgtactccgatgtc
aagtgtggcaaatacttaattaggggagtgaaggtacgacaacccgccactgggaaaccc
gaagccaagaaacctgcgaaacgaagctatcgtagcacctcccaatcggccagaagctct
ccttcgtcaccaaccaaaataaccgcgatttaa
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