Cynara cardunculus var. scolymus (artichoke): 112517651
Help
Entry
112517651 CDS
T05604
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 6
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112517651
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccav04121
]
112517651
Enzymes [BR:
ccav01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112517651
Ubiquitin system [BR:
ccav04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
112517651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
112517651
NCBI-ProteinID:
XP_024980825
LinkDB
All DBs
Position
LG 1:complement(16010743..16013839)
Genome browser
AA seq
432 aa
AA seq
DB search
MADRTQNIIRRLQTLAPAAEFSDSDDDDEEIPREEFGPLNKRPRFIESAAHSPPQLQVRP
QSPIQQSQTVTGSNTYIEEVPASSSXGYETTTDEDDDLFDIEEDDDLDDIDDLDEGEEED
PDDVEEEGGEEVNTGGEEEGDDSVAEGEHQQQHVTEPPTSVASLTGREANAGDARNAXAA
ALDAATTVMLTDKTLLDCPGCLKPLRAPIYQCENGHVSCSTCCDNANGMCLSCTSPVDFT
RNLAMEKLTESILAYCKYRIFGCTEIMIYHKLVEHEQVCPQITCLCPHPSCSFVGFAEDL
YDHFNICHPSSATPFTFDTAFAITCENNQKHVFLQERNEQVIFILNHDLGENNRTFYVDC
IGPAKFNRVFVYQLTAKHLETYLSLQTVPEVYVKWEQHAPNKKYLTIPADFLDGNIDQFV
INICIKKAHPFE
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggccgacagaactcaaaacataatcaggaggcttcaaactttggctccagctgcggaa
ttttctgacagcgatgacgacgatgaggagattcctagggaagaatttgggccacttaat
aagcggccgcggttcatcgaatcggcggcgcattcgccaccccaactccaagtgcgaccg
cagagcccgattcaacagtcgcagacggttacgggatcgaacacgtacatagaagaggta
cctgcttcgagttccgawgggtatgagaccacgacggatgaagatgacgatcttttcgac
atcgaggaagacgacgatctggacgacatagacgatctggatgaaggtgaagaagaagat
cctgacgacgtggaggaggaaggaggagaagaagtgaatacgggaggcgaggaggagggg
gacgatagtgttgcggaaggcgaacatcagcagcagcatgtgacggagcctcctacttcg
gtagcatcgctgacaggacgagaagcaaatgccggtgatgcacgtaacgctkttgcagcg
gcgttagatgctgcaactacggtgatgctaaccgataagaccttgctggattgcccaggc
tgcctcaaacctttgcgtgccccgatctaccagtgtgaaaatggacacgtctcatgttcc
acctgttgcgacaatgcgaatggtatgtgtctttcgtgcacctcaccagtcgacttcact
cgtaacctagccatggagaagctaactgaatcaatcctagcatactgcaaatacaggata
tttggttgcaccgagatcatgatttaccacaaacttgttgagcatgaacaagtctgcccc
caaatcacatgtttatgccctcatccctcatgctcatttgttggatttgcggaagacctt
tacgaccatttcaacatatgtcatccatcttctgctactccttttacttttgacactgcc
tttgctattacctgtgaaaacaaccagaaacatgtgtttcttcaagaacgcaatgaacag
gtcatcttcattctaaaccatgaccttggagaaaacaatagaaccttctatgtagattgc
attgggccggccaaattcaacagagtgtttgtctaccagctaaccgcaaaacatttggag
acatatttatctttacagactgtgccggaagtctatgtgaaatgggaacaacatgcaccc
aacaagaagtatctaactattccggcagactttctggatggaaacattgatcaattcgtc
ataaatatatgtattaagaaagctcatccgtttgagtga
DBGET
integrated database retrieval system
