Cynara cardunculus var. scolymus (artichoke): 112517822
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Entry
112517822 CDS
T05604
Name
(RefSeq) protein ELC-like
KO
K12183
ESCRT-I complex subunit TSG101
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03250
Viral life cycle - HIV-1
ccav03272
Virion - Hepatitis viruses
ccav04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
112517822
03272 Virion - Hepatitis viruses
112517822
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112517822
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112517822
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccav04147
]
112517822
Membrane trafficking [BR:
ccav04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
112517822
Exosome [BR:
ccav04147
]
Exosomal proteins
Proteins found in most exosomes
112517822
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UEV
Vps23_core
PPR_1
PPR_2
PPR
DUF685
Motif
Other DBs
NCBI-GeneID:
112517822
NCBI-ProteinID:
XP_024980962
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Position
LG_9
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AA seq
456 aa
AA seq
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MGNLRRGMELMDCMKNNGRMSVSKFVYNVLIGGMCKEKRVMDARKLFDEMLERDVVSVML
TGWVFSGRSSETESWSDKITGEGHRSGGGCRKRTPDLVLVLFLLYNDRDSENSGIKISNL
FNMVSPSLVDIIDKAIFCNTVYALAYTDSDQKWLIRKHLLSLHQEFSSLYPKVGTFIHND
GTMVHLLKAEGYLNVSHLLPLVHVTIWVHEYYPHVAPMVQVTSDPTIPIRSNHPFVDPSG
VTTSSYLYMWGPSGYDLLGLAYNLVKLFSLDHPFHFVSSPSISHPSYVSKMEGMDRLWWM
LHYDMIALRESINDEVQNLTTLQAEMKVRVNITTDMIIGLDHEKTDLKQIVKEMTDETDV
LISWLAVNKVNLSVAMGGKLEDAFECVDDDSKWALELLAEDKALEDSMYALDKALDDGVV
ASEAYFRQVRSLARDQFLTRAKLVKLKGPQVFKFLY
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggggaacttgagacggggtatggaattgatggattgcatgaagaataatggtaggatg
agcgttagtaagtttgtgtataatgttttgatcggtgggatgtgtaaagagaagagggtg
atggatgcacgaaagctgttcgatgaaatgcttgagagggatgtggtgtcggtaatgctc
acaggttgggtgtttagtggtcgatcatcggagacggagtcttggtcagacaagataact
ggagaaggtcaccggagtggtggtgggtgccggaaaaggacaccggatttggtccttgtt
ctattcttgttgtataatgatcgtgactctgagaattcagggatcaagatttcaaatctt
ttcaacatggtatcgccatctctagttgatatcatcgataaagcgatattttgcaacact
gtatatgcattagcatatactgattcagatcaaaaatggctaatacggaaacacttactt
tctcttcatcaagaattttcgtcgttgtatcctaaagtcggtacgtttatccacaatgat
ggaaccatggtgcacctattgaaagccgagggttaccttaatgtctctcacctgttgcct
ttggttcatgtaaccatttgggtccatgaatattatcctcatgtcgcccccatggttcag
gtgacatcagacccaactatcccaattcgttcgaaccacccatttgtagatccttcaggt
gttaccacctcgtcatatctctacatgtggggtccatctgggtacgacttgttaggtctt
gcatataatttggtaaaattattttcattagatcatccatttcattttgttagttccccg
agcatatctcacccctcttacgtgtccaaaatggagggcatggatcgactttggtggatg
cttcactatgacatgatcgcgttgagggaaagcataaacgacgaggtacagaatcttact
acgcttcaagctgaaatgaaggtgcgtgtcaacatcacgaccgacatgatcattggattg
gaccatgaaaaaactgatctaaagcaaatagtaaaagaaatgacggatgagactgacgtg
ctaataagttggttggcagtcaataaggtaaatttaagtgtggcgatggggggaaaactc
gaggatgcgtttgaatgtgtggatgatgactcgaaatgggcgttggaattgttggctgaa
gacaaagctttggaggattcgatgtatgcactcgataaggctcttgacgatggggttgtg
gcctccgaagcttattttagacaagttcggagcttggcaagagaccagttcttaaccaga
gccaaactcgtgaagttaaagggtcctcaagtgttcaagtttctctattaa
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