Cynara cardunculus var. scolymus (artichoke): 112517875
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Entry
112517875 CDS
T05604
Name
(RefSeq) auxin response factor 18
KO
K14486
auxin response factor
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
112517875
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Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
112517875
NCBI-ProteinID:
XP_024981016
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Position
LG 1:complement(10210187..10215032)
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AA seq
679 aa
AA seq
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MKEADKGVNPQLWHACAGGMIQMPLPSSNVYYFPQGHAEHTLTNVDFSGMPRVPALILCR
VIDVKFLADLETDEVYAKIRLMPLGNIDNGYNGDVDDGVSVGTRNLSESSEKPSSFAKTL
TQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVIAKDVHGETWKFRHIYRGTPRRHL
LTTGWSTFVNQKKLVAGDSIVFVRAENGDLCVGIRRAKRGGAGGPDSSSGWNSYSGSSAS
FYGGFSAYLRDNENKLIRSGSNRNINSSGRGKVRPEDVIEATSLAANGQPFEVAYYPRAS
TPDFCVKASSLTASLSSQWCAGMRFKMPFETEDSSRISWFMGTVSSVEVADPFHWPNSPW
RLLQVTWDEPDLLQNVKRVSPWLVELVSSMPVIHLSPFSPQRKKLRLPQPPDLPQGDYTL
SSFSGNPLGPSSPFCCPPDNVPASIQGARHARFGIPLLDLNVTHKLQLGLFPSSLKHLDS
HAKDPDDIIEQPMDGKNDDISCLLTMGSSSLKLDKSDHKVKAPLFLLFGQPIHIEQQISS
DQVPVAKPSSNRNANEFLQSGEHGLNSGHCKVFLESEDVGRTIDLSVLESYEELEKTLAN
LFGIETFNSLPHVLYKDSTGDVKRIGDEPFSEFARKARRLTIPLDACNLDDKRKWNTNLQ
TGEYGVESSNQTGPMTIFA
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaggcagacaagggtgtaaacccccaactttggcatgcctgtgctggtgggatg
attcaaatgcctttgccgagttcgaatgtctactatttccctcagggtcatgctgaacat
acacttactaatgtagattttagtgggatgcctagggttccggctttaattctttgcagg
gtgattgatgttaagtttctggcagacttggaaaccgacgaagtctatgccaagattagg
ttgatgcctctaggaaacattgataatggttacaatggagatgtggatgatggggtttcg
gttgggactcgtaacttgtctgagtcttcagagaaaccatcttcttttgcaaaaacattg
actcagtctgacgccaacaatggtggggggttttctgtccctcggtattgtgcggagacg
atatttcctcgtttggattattcagctgacccccctgttcaaactgtgatagctaaggat
gttcatggcgagacttggaagtttaggcatatctatagggggactcctaggaggcatctt
ctgactactggatggagtacttttgtgaaccagaaaaagctggttgctggggattccatt
gtatttgtgagggcagagaatggggatctttgtgttggaattaggcgggctaagagaggg
ggcgctggtggtcctgattcctcatctggttggaattcttattctggaagctctgcttct
ttctatggggggttttctgcctatttgcgtgacaatgagaacaagttgataagaagtggc
agtaatagaaatatcaattccagtggaaggggaaaggtgaggcctgaagatgttattgaa
gccacatcccttgctgccaatgggcagccatttgaggttgcttattacccacgtgcaagc
actccagatttttgtgtgaaggcttcttctttgactgcttcattgagcagtcagtggtgt
gctggaatgaggttcaaaatgccatttgaaacagaagattcatcacgaataagctggttt
atgggaacagtatcttctgttgaagttgctgacccgtttcactggccaaattctccatgg
cggcttctacaggtcacttgggatgaaccagatctcttgcaaaatgtgaagcgagtgagt
ccatggttggttgaactggtgtcaagtatgccagtcattcatctgtcacccttctcacca
cagagaaagaagttacgattaccccaacccccagatttacctcagggcgactatactctt
tcgtccttttcaggcaatccccttgggccaagcagtcctttctgttgtccacctgacaac
gttcctgcaagcattcagggagccaggcatgctcgatttgggatcccattattggatctc
aacgttacccacaaactgcagttgggtctttttccttccagtctcaagcaccttgattca
catgctaaagatcctgatgacattattgaacaacccatggatggcaaaaacgatgatata
tcatgcttgcttaccatgggaagttctagtcttaagttggacaaaagtgatcacaaagta
aaggcacctctgtttttactatttggtcaaccgattcacattgagcagcaaatctctagc
gaccaagttccagtggcaaaaccttcatcaaacaggaatgcaaatgaatttttgcaatct
ggtgagcatggattgaatagtggtcattgcaaagtgtttttggaatcagaggatgtgggt
agaactattgacctttctgttctcgagtcttatgaagaacttgagaaaacactggcaaac
ttgtttggaattgaaacatttaacagtttgcctcatgtgctatataaagattcaacaggt
gatgtcaaacgaattggtgatgaaccattcagtgaatttgcaagaaaagctagaaggctt
acaattccgttggatgcatgcaaccttgatgataaaagaaaatggaatacaaatctgcaa
accggtgaatatggagtggagtcttcgaaccagacggggcctatgaccatatttgcgtag
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