Cynara cardunculus var. scolymus (artichoke): 112517894
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Entry
112517894 CDS
T05604
Name
(RefSeq) E3 UFM1-protein ligase 1 homolog isoform X1
KO
K22755
E3 UFM1-protein ligase 1 [EC:2.3.2.-]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112517894
04121 Ubiquitin system [BR:
ccav04121
]
112517894
Membrane trafficking [BR:
ccav04131
]
Autophagy
ER-phagy
Other ER-phagy associated proteins
112517894
Ubiquitin system [BR:
ccav04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
112517894
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
E3_UFM1_ligase
UFL1
UFL1_C
WHD_UFL1_5th
Motif
Other DBs
NCBI-GeneID:
112517894
NCBI-ProteinID:
XP_024981036
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Position
LG_9
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AA seq
820 aa
AA seq
DB search
MDEELLELQRQFESAQQAKSSIRLSERNVVELVQKLRQLNIIDFDLLHTVSGKEYITPEH
LRIEIVSEIKKLGRVSLIDLADIVGVDLYHVEKQAQIVVADDSLLMLINGEIISDWYWNN
VCEEINDRLQECSQIALAEIAAQLQVGSELLVTVLEPRLGTRIKGRLEGGQLYTPAYVAR
VNAMVRGAARGITVPMNLSALWGSLQLLLQEMDGASGVAVEGSFFQSMFNGLVKEGQVLG
SVRAGVHWTPSVFAIAQKECVDSFFSQNSVVSYEALHKLGITQPIQFLQSRYPEGIPLVT
LFVHPSTVEMLDAAVEDAIERGSWIDSLSVLPASFGPQDAHKMLSLCPSVQTTLKANKAL
ILGDSYVFSTGFVKDLYERMEKDLDTINFSGPSSTGLADDWHVTKVAKSGQETSGAPADF
NDTSSESGSNKQAADRGSKRKKGKPNINSKAGAVDNSSDNQEPVPAKSKKNQRKGKVASS
SLGPDSKSNAKKDVDKIKEESLGIFSEEELCQKITELVPDFEEQGIDSETVLVPLASHLR
PMLLNAWNERRKAALTDNGQKIKRLLDNLQKKLDESSLNMQLYEKGLDLFEDNPSTLALL
HRHLLRTTAAPMVDMLLSNMDMLNKLKNGLDIQDTDNPESISLTSGDRIALAKKFDGPLS
VKAIAVIEALEGKHVEAYMTTLRALADECGLTVKKLDKKLERTLLHSYRKDLSAQVSAET
DPVAILPKVVSLLYIQFYARALQAPGRTISVAISKLKDKLDDSAYKTLEEYHAATVTLLT
LISASTGDEEDCTSDRTLSKKELLERLMPALKALVSRPSQ
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaattgctcgaacttcaaaggcaatttgaatctgctcaacaagctaaatca
agcattcgtttatcagaacgaaacgtcgttgaattggttcaaaagctccgacaactcaat
ataatcgacttcgatctcctccacactgtatccggcaaagagtacatcactccagagcat
ctaaggattgagattgtctcagagataaagaaattagggcgtgtatcgttgattgatctt
gcggatattgttggtgttgatttgtatcatgtggagaaacaagcacagattgttgtagct
gatgattcgttgctgatgttgatcaatggtgaaataatatcggattggtattggaataat
gtttgtgaggagattaacgatcggctgcaagaatgcagccagattgcgcttgctgagatt
gcggctcagttgcaagttggttcggagttgcttgtgaccgtgttggaacctcgacttggc
acccggataaaaggtagacttgaaggtggacaactgtacacaccagcatatgttgcacgc
gttaatgcaatggtccgtggggctgctaggggtatcactgtacctatgaacttgtcagca
ttgtgggggtcgttacagttattactacaagaaatggatggtgcaagcggtgtggctgtt
gaaggatcatttttccaatcaatgttcaatgggttggtgaaggaagggcaagttcttgga
tcagttcgtgctggagttcactggacacccagtgtgtttgccattgctcaaaaggaatgc
gtggattctttcttttcacagaactctgttgtcagctatgaagctctgcataaacttgga
attacacaacccattcagtttctgcagtccaggtatcctgaaggtatacccttggttact
ttatttgttcacccatcgactgttgagatgctggatgctgctgtagaggatgccatagaa
cgtggtagctggattgattcgctttcggttttaccagcatcctttggtccacaggatgca
cataagatgctgtctctttgtccatctgtacagacgacacttaaagctaataaagctctc
attttgggggactcatatgttttcagcactggatttgtcaaggatctgtatgaacgtatg
gagaaagatttggataccattaatttttctgggccatctagcactggacttgctgatgac
tggcatgtcaccaaagttgctaaatcaggacaggaaacaagtggtgctccggctgatttc
aatgacacaagtagtgaaagtggttctaacaaacaagcagcagatagaggatcaaagaga
aaaaaggggaaacccaacataaattcaaaggcaggtgcagttgataacagttcagataat
caagaacctgttcctgctaaatcaaagaaaaaccagagaaaaggcaaggttgcatcttcg
tcacttgggcctgactcgaaatcaaatgccaagaaagatgttgataaaataaaagaggaa
agccttggtattttttcagaagaagaactatgtcaaaagataactgaacttgttccagac
tttgaagaacaaggcattgattcggagacagttcttgtacccttagctagtcatttacga
cccatgctgctcaatgcatggaacgagagaagaaaggctgcattaacagataatggacaa
aaaattaaacgtctgcttgataatttgcaaaagaaacttgatgagtcatcactaaatatg
cagttatacgagaaaggtctagatttgtttgaagacaacccatcaaccttggcgcttttg
caccgacatttactaagaactacagctgcccctatggtagacatgctcttatcaaatatg
gatatgctcaataagctgaaaaatggtttagacattcaagacactgacaatccagaatcg
atttcgcttacctctggggaccgaattgctctggcaaagaaatttgacggacctctatct
gtaaaggctattgcagttattgaagctttggaaggaaagcatgttgaagcatacatgaca
acactaagagcacttgcagatgagtgtgggttaaccgtgaaaaagcttgacaagaaattg
gaaagaactcttctccattcgtatcgcaaggatttgtcagctcaggtttctgctgaaact
gatcccgtcgccattctgcctaaagttgtttctctactttatatacagttttacgcaaga
gctcttcaagcaccggggaggactatttcagttgcaatttctaaattgaaggataaacta
gatgattcagcatacaaaactctagaagagtaccatgctgcaacagtgacacttttgacc
ctaatatcagcatcaacgggcgatgaagaagattgtacatcggacagaactttgagcaaa
aaggagctcctggagaggttaatgcccgctttgaaagccctagtctctcggccttcacaa
tag
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