Cynara cardunculus var. scolymus (artichoke): 112517911
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Entry
112517911 CDS
T05604
Name
(RefSeq) 26S proteasome regulatory subunit 6B homolog
KO
K03063
26S proteasome regulatory subunit T3
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
112517911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ccav03051
]
112517911
Proteasome [BR:
ccav03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
112517911
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_16
AAA_5
AAA_lid_3
AAA_2
AAA_22
DUF815
RuvB_N
nSTAND3
AAA_28
NPHP3_N
TIP49
Sigma54_activat
RNA_helicase
AAA_14
Mg_chelatase
AAA_24
TsaE
IstB_IS21
AAA_7
Parvo_NS1
AAA_18
AAA_30
NTPase_1
NACHT
ATPase_2
AAA_3
AAA_25
NB-ARC
AAA_33
DUF5906
AAA_11
ABC_tran
ATPase
GPS2_interact
DUF3450
Viral_Hsp90
AAA_19
DUF6570
AAA_17
Motif
Other DBs
NCBI-GeneID:
112517911
NCBI-ProteinID:
XP_024981092
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All DBs
Position
LG 9:17234420..17241444
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AA seq
416 aa
AA seq
DB search
MASTMVLEPKPSSSATPPPTLPNPYTMDSPLIDTEDDLYTRLKSLDRQIEFIEIQEEYVK
DEQKNLKRELLRSQEEVKRIQSVPLVIGQFMEMIDQNNGIVGSTTGSNYYVRILSTINRE
LLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVE
LPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGE
GPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQT
VNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLED
YVSRPDKISAAEITAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFDFYK
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgactatggttctggagcctaaaccctcctcatcagcaacgccaccaccaacc
cttcccaatccctacaccatggactctcccctaatcgacaccgaagatgacctctacact
cgtctcaaatccctagaccgccaaatcgagttcattgaaatccaggaagagtacgttaaa
gatgagcaaaaaaatctcaagcgagaactccttagatctcaagaggaggttaagcggatc
caatcggtgccgctcgtaattggtcagtttatggagatgatcgaccagaataatggcatt
gtggggtcaactacagggtctaattactatgttaggattttgagcacgattaatcgggag
ttattgaagccctcggcatctgtggcgttgcaccgccattctaatgctctcgttgatgtg
ttgccaccggaggctgactcgagtatttctcttcttagccagtctgagaaaccagatgtt
acttacaacgatatcggaggatgtgacattcaaaagcaggaaatacgcgaagctgttgag
ttgcctttgacccatcatgaattgtacaaacagataggtatagatcctccccgtggtgtt
ttgctctatggtcctcctggcacgggtaaaaccatgctcgccaaagctgttgcaaatcat
actactgcagcctttattagggtagttggctcagaatttgttcagaagtatttgggtgag
ggacccagaatggttcgtgatgtgtttcgtcttgccaaagaaaacgcgcctgcaataata
tttattgacgaggtagatgcaattgctactgccaggtttgatgctcagactggagctgat
agagaagtgcagcgaattctmatggaactcttaaatcagatggatgggttcgaycagacc
gtcaatgttaaggttataatggcaactaaccgagctgatactttggacccggcccttctt
cgtcctggtaggcttgaccgcaagattgartttcctttgcctgatagacgacaaaagagg
cttgttttccaggtttgcactgctaaaatgaatttaagtgaygaagttgacttggaagat
tatgtttctcggcccgacaagatcagtgctgccgagatcacggcaatttgccaagaagca
ggaatgcatgcagtccgcaagaaccgatatgttattcttcccaaggacttcgagaagggc
tacagaaccaacgtraagaagcccgacactgattttgatttttacaagtaa
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