Cynara cardunculus var. scolymus (artichoke): 112517979
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Entry
112517979 CDS
T05604
Name
(RefSeq) LEC14B protein
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccav04121
]
112517979
Ubiquitin system [BR:
ccav04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
112517979
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_NUP159_NUP214
WDR54
Motif
Other DBs
NCBI-GeneID:
112517979
NCBI-ProteinID:
XP_024981221
LinkDB
All DBs
Position
LG 9:13625476..13637817
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AA seq
489 aa
AA seq
DB search
MFFRAWNTAIGDMGYALSRLEIDPDFSDSESSPVGDDNNSPQPSSQNDLEHEVAQLTKLG
STPHDRLQRVLPRRQEFPVSPVKMLAGREGNYSGRGRFSAADRCHLLNKYLPVKGPSIID
QLTTRAYVSQFSTDGSLFVAAFQGSHIKIYNAEKGWKLQKNIVAKSLRWTVTDTSLSPDK
RFLVYATMSPIVNIVNIGSAATESHANVTEIHEGLEFSADDEEGYSFGIFSVKFSNDGRE
LVAGSSDDSIYVYDIEANRLSLRIQAHTSDVNSVCFADEASHLIYSGSDDNLCKVWDRRC
FRSKGKPAGILMGHLEGITFLDSRGDGRYFISNGKDQTIKLWDIRKMSSNATRTPGFRNY
EWDYRWMDYPLRARDVKHPCDQSVATYKGHSVLRTLIRCYFSPEYGTGQKYIYTGSHDSC
VYVYDLVSGAQVARLVHHKSTVRDCSWHPHYPMLVSSSFDGDIAKWEFPGNGETPIPTNN
SRPRRRHFD
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgttctttagggcttggaataccgctataggtgacatgggatacgctcttagtagattg
gagatagacccggatttttccgacagtgaatcctctccggtcggagatgataataacagt
cctcaaccttcgtcacagaacgatctcgagcatgaagttgctcagcttacgaagctcggt
tctacaccccatgaccggttgcaaagggttcttccacggaggcaggagtttcctgtttca
ccggtgaagatgttagcgggtcgagaagggaattattccggcagaggaaggttctctgca
gcagatcggtgtcaccttttaaacaaatatttgcctgttaaaggtccttcgataattgac
caattgactactcgggcttacgtctcgcaattttcaaccgatggttccctttttgttgct
gcatttcagggaagccacattaaaatttataatgctgaaaaggggtggaagcttcagaag
aatattgttgccaaaagcttgcgctggacagtaactgatacgtctctttcaccagataaa
cgtttcttggtttatgccactatgtctcctattgtcaacattgttaatattggatctgct
gcaacagagtctcatgcaaatgtcacggagatccatgaaggcttagaattttctgctgat
gatgaagaggggtattcgtttggaattttttccgtgaaattttctaatgatggtagagaa
cttgtagctggaagtagtgatgattcgatatatgtttatgatattgaagcaaacaggctt
tcccttcgaatacaagcacatacgtcagatgtaaacagcgtatgctttgccgatgaagcc
agccatctgatatattcagggagtgatgataatctctgtaaggtttgggacagacgctgt
ttcagatcaaaaggaaagcctgctggaattctgatgggacacctagaaggaattacattt
cttgacagccgtggggatggtcgttatttcatttcaaatgggaaggatcagacaatcaag
ctttgggatatccgaaaaatgtcttctaatgccactcgcactccggggttcaggaactat
gaatgggattatagatggatggactacccacttcgggcacgagatgtgaagcatccatgt
gaccaatctgttgccacatataaaggtcattcagtattgcgtacattaatccgctgctac
ttttcaccagaatatggcaccggccagaagtacatttataccggatctcatgattcttgt
gtttatgtttatgatttggtgagtggagcgcaagttgcaaggctcgtgcaccataagtca
accgtacgagattgcagttggcaccctcattatccgatgctcgttagttcttcattcgat
ggagatattgccaagtgggaattcccgggtaacggagagaccccgattcccacgaacaat
agtaggcctcgaagacggcattttgattga
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