Cynara cardunculus var. scolymus (artichoke): 112518034
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Entry
112518034 CDS
T05604
Name
(RefSeq) ABC transporter B family member 21-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112518034
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccav02000
]
112518034
04147 Exosome [BR:
ccav04147
]
112518034
04090 CD molecules [BR:
ccav04090
]
112518034
Enzymes [BR:
ccav01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
112518034
Transporters [BR:
ccav02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
112518034
Exosome [BR:
ccav04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112518034
CD molecules [BR:
ccav04090
]
Proteins
112518034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_29
Zeta_toxin
AAA_16
ABC_ATPase
RsgA_GTPase
AAA_15
AAA_21
AAA_30
AAA_7
APS_kinase
DEAD
nSTAND1
Motif
Other DBs
NCBI-GeneID:
112518034
NCBI-ProteinID:
XP_024981326
LinkDB
All DBs
Position
LG 9:complement(12284946..12289772)
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AA seq
1272 aa
AA seq
DB search
MMNAGSKEKASTSTSGDADADADAVQPQEKQKESTYTVPFYKLFAFADSSDHMLMIAGTL
GAIGNGICMPLMTILFGDLIDAFGQNQNTNDVVHVVSKVSLKFVYLAIGAGVASFLQVAM
WMVTGERQAARIRNLYLKTILRQDVSFFDKETNTGEVVGRMSGDTVLIQDAMGEKVGKFT
QLLATFVGGFVIAFIKGWLLTLVMLTSIPPLVISGGVMSVIISKMASRGQNAYAKAANVV
EQTIGSIRTVASFTGEKKAVANYNETLVDAYKSGVHEGLAAGLGLGSMMLIVFCSYALAV
WYGAKMVLERGYTGGTVLTVIFAVLTGSMSLGQASPCLSAFAAGRAAAFKMFETINRKPE
IDAYDTRGKVLSDIRGDVELKDVYFTYPARPDEQIFSGFSLFISSGTTAALVGESGSGKS
TVISLIERFYDPQAGEVLIDNVNLKEFQLKWIREKIGLVSQEPVLFASSIKDNILYGKNG
ASMDEIRVAVELANAAKFIDKLPQGLDTMVGEHGTQLSGGQKQRIAIARAILKDPRILLL
DEATSALDAESERIVQEALDRIMVNRTTVIVAHRLSTVRNADMIAVIHRGKMVEKGSHSQ
LLQDPEGAYSQLIKLQDINNDSRQNGPEDQDKRTSYQRSISRGSSSIGNSSRRSISISFG
MPTQLGVSTAESMEIEASPAKEGSEKPPKVPLRRLAYLNKPEIPVLILGAIAAIINGAVL
PVFGILISSMIKTFYEPPDKMKTDSRFWALMFVVLGVVSFLAFPGRSYFFSVAGSKLIRR
IRSLCFEKVINMEVGWFDKPENSSGAIGARLSADAASVRGLVGDALAQLVQDSSSAAAGL
AIAFAACWQLALIILALVPLIGVNGYVQMKFMKGFSADAKIMYEEASQVANDAVGSIRTV
ASFCAEEKVMELYRNKCEGPKKTGIQQGLISGIGFGVSFFLLFCVYAASFYAGARLVEDG
KTTFSDVFRVFFALTMAAVAVSQSSSFAPDTSKAKSSAVSVFAMLDRKSEIDPSDESGLT
LDHVKGEIELRHISFKYPTRPDVQIFRDLCLTIHSGKTVALVGESGSGKSTVISLLQRFY
NPDSGCITLDGTEIQKFQLKWLRLQMGLVSQEPVLFNDTIRANISYGKDGDATEAEILAA
SELANAHKFISGLHQGYNTVVGERGVQMSGGQKQRVAIARAIVKSPKILLLDEATSALDA
ESERVVQDALDKVMVNRTTVVVAHRLSTIKGADVIAVVKNGVIVEKGKHENLINIKDGSY
ASLVALHMTSSK
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatgccggtagtaaagaaaaggcctccacctccacctctggtgatgctgatgct
gatgctgatgctgttcaaccccaggaaaaacaaaaggagagcacatatactgtcccattt
tacaagctctttgcttttgcagattccagtgatcacatgttgatgatcgcgggcaccctc
ggtgccatcggtaatggaatatgcatgcccctcatgactattcttttcggcgaccttatt
gatgcttttggtcagaaccagaatactaacgatgtggtccatgttgtttccaaggtatcg
ctgaaatttgtttacctggcaattggggctggtgtcgcatcattcctccaggtggcaatg
tggatggtaacgggagaaagacaggctgcaagaataagaaatctgtatctgaagaccata
ttgagacaagatgtctccttctttgacaaagaaacaaatacaggggaagttgttggcagg
atgtctggcgataccgtcctcatacaagatgccatgggggagaaggttgggaaattcaca
cagctactggcaacgtttgtaggaggttttgtgattgcattcatcaaagggtggcttctt
acacttgttatgttaacctcaattcctccgttggtgatttctggtggagtcatgtcagta
atcatatccaagatggcatcacggggtcaaaatgcttatgctaaagcagccaatgttgtc
gagcagacaattggctcaatcaggacggttgcttctttcacaggcgagaaaaaagctgtt
gcaaattacaatgagacccttgtagatgcttacaagtctggtgttcatgaaggactggct
gctggccttggtcttggatccatgatgctcattgtattctgtagttatgctttggctgtt
tggtatggtgcaaagatggtactggaaagggggtacactggggggactgtccttactgta
atttttgctgtgctcactggatctatgtctcttgggcaggcgtctccctgtttgagtgca
tttgctgcaggtcgggcagcagcttttaagatgtttgaaactataaacagaaagcctgaa
atagatgcgtatgacacaagggggaaagtattgagcgatattcgtggtgatgtagagtta
aaggatgtgtattttacttatccggcaagaccagatgagcaaatattcagtggcttctct
cttttcatctctagtggcacgactgcagctttggttggagaaagtggaagtggaaagtca
acagtgatcagcctaatagagagattttacgatcctcaagcaggggaggttcttattgat
aatgtaaatctcaaagaattccaactaaaatggattagggagaaaattggtcttgttagc
caagaaccagtcctgtttgcatccagcattaaggataatattttgtacgggaaaaatggt
gcatctatggatgagattagagttgcagtggagctagcaaatgctgctaaatttattgat
aaactacctcagggactggacaccatggttggtgagcatggaacacagctctcaggtgga
cagaagcaaagaattgctatagctagagcaattcttaaagatcctcgaatcctgcttctg
gatgaagcaacaagtgcacttgatgcagaatccgagagaattgtgcaggaggcattggac
aggataatggtcaatagaacaaccgtcattgttgcacatcgtttaagcacagtgagaaat
gctgatatgattgcagtcattcatcggggcaagatggttgagaaaggttcacattcgcag
ctactccaggatcctgaaggagcatattcgcaacttataaaattgcaagacatcaacaat
gattcaagacagaatgggccagaggaccaagataaaaggacatcctaccagcggtcaata
agccggggctcatctagcataggaaatagcagtcgccgctcaatatctatctcgtttggt
atgcctacacagttgggtgtctctacagctgaatccatggagattgaagcctctccagca
aaggaaggttcagaaaaacctcccaaagtcccactccgccgccttgcctatctcaacaag
ccagagataccagtgctcatattgggtgcgatagctgctattattaatggagcagtcctc
ccggtctttggcatactgatttctagcatgatcaagaccttctatgaaccacccgataaa
atgaagaccgactcgaggttctgggctctaatgtttgtagtcctgggagtggtatcattt
ttagcttttcctgggagatcatattttttctctgttgctggatctaaactaataagaagg
atcagatcactatgcttcgagaaggtgattaacatggaggtaggttggtttgataagccg
gaaaactccagcggagcaatcggtgccaggctgtcagcagatgcagccagtgttcgtggt
ttagtcggagatgcactagctcagcttgttcaggactcatcctctgctgctgctggtttg
gccattgcctttgcagcttgttggcagttggcactcataatacttgctctggttccccta
ataggagttaacgggtacgttcagatgaaattcatgaaaggcttcagtgctgatgctaag
ataatgtatgaggaagcaagtcaggtggcaaacgatgcagttggaagcataaggacggtc
gcttccttttgtgcagaagagaaagtgatggaactttacagaaataaatgtgagggtccc
aagaaaacagggatacagcaaggtttgatcagcgggattggatttggagtgtcctttttc
ttacttttctgtgtgtacgcagccagcttttatgctggagctcggcttgttgaggatggc
aagactacattctcagatgttttcagggtattctttgctctgacaatggcagccgtagca
gtctctcaatcaagctcctttgccccagatacaagcaaagccaagagttctgctgtgtcc
gtgtttgccatgctagatcgcaagtcagagatagacccaagtgatgaatctgggttaaca
ttggaccatgttaagggagaaattgagcttcgtcacattagctttaagtatcctaccaga
cctgatgttcagatattccgtgatctatgtctgaccatccatagcggcaagacagtggca
ttggttggagagagtggaagcgggaaatcaacagtaatctcactattgcaaagattttac
aatccggattctggttgtatcacgctggatggaaccgagatacagaagtttcaactcaag
tggctgaggctgcagatgggtctggtgagccaagaacctgtgttgttcaatgacaccatc
cgagccaacattagttatggaaaagacggtgatgcaactgaggctgaaatactagctgct
tccgagttggcaaatgcccacaagttcatcagtgggttgcaccagggttacaatacagtg
gtaggggagagaggagtgcaaatgtcaggtgggcagaaacagagagtagcgattgctaga
gcgattgtgaagagtcccaagatactattactagatgaggctacaagcgcactggatgca
gagtcggagagagtggttcaagatgcgttggataaggtaatggttaacaggaccacagtc
gtggttgctcatcgcttgtcaaccattaagggagcagatgtgattgcagtcgtcaagaat
ggagtcatcgtcgagaaagggaagcatgaaaatctaatcaatatcaaggacggatcctac
gcatctttagttgcgcttcacatgacctcatccaagtag
DBGET
integrated database retrieval system
