Cynara cardunculus var. scolymus (artichoke): 112518082
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Entry
112518082 CDS
T05604
Name
(RefSeq) histone H2AX-like
KO
K11251
histone H2A
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112518082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccav03036
]
112518082
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccav04147
]
112518082
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Nucleosome assembly factors
Histones
112518082
Exosome [BR:
ccav04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112518082
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_H2A_C
Histone
CBFD_NFYB_HMF
Cdc6_lid
Motif
Other DBs
NCBI-GeneID:
112518082
NCBI-ProteinID:
XP_024981418
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All DBs
Position
LG 9:complement(13581017..13581818)
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AA seq
141 aa
AA seq
DB search
MDSVKATKSVGGRGKPKSTKSVSRSSKAGLQFPVGRVSRYLKAGRYAKRVGSGSPVYLSA
VLEYLAAEVLELAGNAARDNKKNRITPRHIQLAVRNDDELGKLLGKVTIANGGVLPKIHQ
TLLPSKKGKGKDEIGSASQEF
NT seq
426 nt
NT seq
+upstream
nt +downstream
nt
atggattcagtaaaagcaacgaaatccgtcggaggaagaggcaaaccgaaatccaccaaa
tccgtctccagatcttcaaaagccggtcttcagttccccgtcggcagagtttcccggtac
cttaaagccggccgatatgcaaaacgtgtcggatctggtagtcctgtttacctctccgcc
gtcctcgaatatctcgctgcagaggttttggagcttgctggaaatgctgcaagggataac
aagaagaacaggatcactccgaggcatattcaattggctgtgaggaacgatgatgaattg
ggcaagttgttgggaaaagtgacgattgctaacggtggagtgttgccgaagattcatcaa
actctacttcccagcaaaaaaggtaaaggcaaggatgagattgggtctgcttcacaagaa
ttttag
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