Cynara cardunculus var. scolymus (artichoke): 112518102
Help
Entry
112518102 CDS
T05604
Name
(RefSeq) probable galacturonosyltransferase 7 isoform X1
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00520
Amino sugar and nucleotide sugar metabolism
ccav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
112518102
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ccav01003
]
112518102
Enzymes [BR:
ccav01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
112518102
Glycosyltransferases [BR:
ccav01003
]
Polysaccharide
Structural polysaccharide
112518102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
112518102
NCBI-ProteinID:
XP_024981439
LinkDB
All DBs
Position
LG 9:complement(1134873..1148922)
Genome browser
AA seq
624 aa
AA seq
DB search
MPGKRRWSWLVIAVLGLVLLSMLVPLAFLLGLHGGFHSVTHTGYATEQRSSASSRKDAAL
DSPLTKEGLSTRVDGLLKNLGPTLPKVLYSVGVSASFGFNMDFRRNSVKEAENRTTGFAV
PTQEVKPPPKRHDVGVSSSAEVTKTIESIGEGQKMCELKFGSYCLWRQEHREKMKDFIVK
KMKDQLYVARAYYPSIAKLPALDQFSHEMKQNIQEFERILSESSSDTDLPPEVEKKLQKM
ETTITKAKSATVDCNNVDKKLRQLVDLTEDEANFHMRQSAFLYQLAVQTTPKSLHCLSMR
LTVEYFKTSPVDADQSESLLNPELLHYVIFSKNVLASSVVINSTVMHARASRNQVFHVLT
DKQSFFSMKMWFFTNTYKDATVQVLNIEDLDLEGHDRTTFSSLSVPQELRVSFLNGDKLS
STESRTEYISVFSHLHYALPKIFSTLKKIVVLDDDIVVQRDLSDLWSLDMDGKVIGALQF
CTVKLGALRSYLGKENYDANSCTWMSGLTIIDLVRWKEQDVTRTYESLVLQRLSKEGKET
EAARLRATLLTFQGLLVALDDGWVVSGLGHNYGISNEVIKKAAVLHFNGNMKPWLELGIP
SYKAHWRKFLNREHRFLSDCNVNP
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgccagggaagaggcgatggagttggcttgtaattgcagtcttgggcctcgttttgctt
tccatgctcgttcctcttgcttttttgcttggtctccatggcggatttcactctgttact
cacacagggtatgctactgagcaaaggagttctgcttcatcaagaaaggatgcagcttta
gattcacctttaacaaaagaagggctatcaacacgtgtagatgggctattgaaaaatctt
ggaccaactcttccaaaggtattgtacagtgtaggggtttcagcatcctttggctttaat
atggattttagaaggaactctgtcaaggaagcagagaacagaaccactggttttgctgtg
cctacacaagaagtaaagccacctccaaaaagacatgatgttggagtcagttcatcagct
gaagttaccaaaactattgaaagcattggtgagggtcaaaaaatgtgtgaattaaaattt
gggagctattgcttatggcgtcaagaacatagggaaaaaatgaaagattttatagttaag
aaaatgaaggaccagctatatgtagctcgagcttactatcccagtattgcaaagcttcca
gcccttgaccaattctcacatgaaatgaagcaaaatattcaagagtttgagcgaatcctc
agtgaaagttcctctgatacagatcttccacccgaggttgagaagaagctgcagaagatg
gaaactacaattactaaagcaaagtcagctactgtggattgtaacaatgttgataaaaaa
ttaagacaactagttgatttgacggaagatgaagccaactttcatatgaggcagagtgct
tttctttaccaacttgcagtccaaacaacaccaaagagtcttcattgcctttcaatgcga
ctaacggtggagtatttcaaaacctctcccgttgatgcagatcagtcagagagtttgttg
aacccggagctacttcactatgttatattttccaaaaatgtgcttgcgtcatctgtagta
attaattcgactgttatgcatgcaagagccagcaggaatcaggtgtttcatgtgttgaca
gataaacagagtttcttttccatgaagatgtggttctttactaatacttacaaggatgct
acagttcaagtgttgaacatcgaagatcttgatttagaaggtcatgatagaactacgttt
tctagtttgtcagtgcctcaagaattacgtgtctctttccttaatggtgataaattatcc
tctaccgaaagtagaacagaatacatctctgtgttttctcatttgcactatgcccttcca
aagatattctcaactttgaagaaaattgttgttcttgatgatgatattgttgtccagcgt
gatttgtctgacttgtggagccttgacatggatgggaaagtaattggtgcattgcagttc
tgcacggtgaaattgggtgcacttagaagttatttggggaaggaaaattatgatgctaac
tcctgtacatggatgtcggggttaaccataattgatttggttcgatggaaggaacaagat
gtcaccagaacgtatgaaagtttggtgctgcagagattgagcaaggaagggaaagagacc
gaagcagctagactacgagcaaccttgcttacctttcaaggactactcgttgctcttgat
gatggctgggtggtatctggccttggtcataactacggtattagtaacgaagttattaaa
aaagcagccgtattacacttcaatggcaacatgaaaccttggctcgaactcggcatccca
agctacaaagctcactggagaaaatttctgaaccgcgaacatcggttcttgagtgattgc
aacgtgaacccataa
DBGET
integrated database retrieval system
