Cynara cardunculus var. scolymus (artichoke): 112518106
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Entry
112518106 CDS
T05604
Name
(RefSeq) blue-light photoreceptor PHR2-like
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
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Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
112518106
NCBI-ProteinID:
XP_024981450
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Position
LG 9:12967364..12971917
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AA seq
444 aa
AA seq
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MDPKPQDSQNSEGKPPSDHQSHLPIVPFTSITLSFPQLLPTHFISSPKISPFSPKIPTTI
KIPSQISSLFNLSLSSTTTLPTKSLLKSTVSANPLQNPLPLNPRRPSDPSNPAGLRRASV
VWFRNDLRVQDNESLTSANNESMSVLPLYCFDPTDFGKSSSGFDKTGPHRASFLIESVSD
LRKNLQARGSDLIVRIGKPETILAELVKEVGAEAVYAHREVSNDEVKGEEKIEMGLKDEG
VEIKYFWGSTLYHIEDLPFKLEEMPTNYGGFREKVKGLKVRKTIEALAQLKGLPSGGDIE
PGEIPSLVDLGLNPSAAMSQAKPVSNGPLVGGETEALQRLKRFAAECQAQPPKETKDGNN
DSIYGANFSCKISPWLAMGCLSPRSMFDELKKSASRTVSAGKDGDGGMNWLMYELLWRDF
FRFITRKYSSSKQRNIAPVTACTA
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggatcctaaacctcaagattctcaaaactccgaggggaaaccaccgtccgaccaccaa
tctcacctccccattgttccttttacatccatcaccctttctttccctcagctccttcct
acccacttcatttcttcaccaaaaatctcacctttttctcccaaaatccctacaactatc
aaaatcccatctcaaatctcctcccttttcaacctttctctttcctccaccaccaccctt
cccaccaaatccctattgaaatccaccgtctctgccaaccctcttcaaaacccattaccc
ctaaaccctcgccgcccctctgacccatccaaccccgccggtctccgccgtgcatccgtt
gtctggttccgtaacgatcttcgtgttcaagataatgaatctttaacttctgccaataat
gagtccatgtctgttttaccactttactgttttgatccaacagattttgggaagtcctca
tctgggttcgataaaacaggcccccatcgagcatcttttttgatcgaatcggtttcggat
ttgagaaagaatcttcaggcaagagggtctgatcttatagttcgaattggaaaaccagaa
accattttagctgaattggttaaagaagttggggcagaggctgtttatgctcatagagaa
gtgtctaatgatgaagttaaaggtgaagaaaagattgaaatgggattgaaagatgaaggt
gtggagattaagtacttttggggaagtacattgtatcatattgaagatctgccatttaaa
ttggaagaaatgccaacaaattatggtggatttagggagaaagttaagggtttaaaggtg
aggaagacaattgaagctcttgctcaattaaagggattgccatctggtggtgatattgag
cctggtgagattccatctctggttgatttgggtctcaatccttctgctgctatgagtcag
gctaaaccggtttctaatggtccccttgttggaggtgagaccgaagcactacaaaggctt
aaaaggtttgctgccgaatgccaagcccaaccgcccaaagaaaccaaagatggaaataac
gatagcatttatggcgcaaatttctcgtgcaaaatctctccgtggcttgcaatgggatgt
ctttctcctcgttccatgtttgacgagttgaagaaatctgcttctagaacggtttccgcc
ggaaaagacggtgatggtgggatgaactggttgatgtatgagctcctatggagagatttc
ttcagattcatcacgaggaaatacagttcgtcgaaacaacgtaatattgctccggttacg
gcttgtacggcttga
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