Cynara cardunculus var. scolymus (artichoke): 112518145
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Entry
112518145 CDS
T05604
Name
(RefSeq) anaphase-promoting complex subunit 5 isoform X1
KO
K03352
anaphase-promoting complex subunit 5
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112518145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccav04121
]
112518145
03036 Chromosome and associated proteins [BR:
ccav03036
]
112518145
Ubiquitin system [BR:
ccav04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Other subunits
112518145
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
112518145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANAPC5
Apc5_N
TPR_14
Mif2_N
Motif
Other DBs
NCBI-GeneID:
112518145
NCBI-ProteinID:
XP_024981504
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All DBs
Position
LG 9:complement(3817470..3870664)
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AA seq
936 aa
AA seq
DB search
MAGILKPQSGFVITPHKVSICILLQVYAPSGQYSVPFPFASVSQHNRLGLFLIALTKSCD
DILEPTLDEFLKLLKEFGGLLDNWLSDHVTGRLSSLSSPDDLFTFFSELRVACPIHFMEF
NVTVSGILAGPETSIVDDDQINLDPNSNLGMYLRRCLLAFNILSFEGMCHLLTNIKTYCK
EAFSCPPYEMSHLDDPTNDLEAPVEYENMDLENFVLQNFTEELESRKRSTERVPFHNHSS
KALSSLIEDIMVSPGQKGKHNHRSAESSQYMSSPTSALPNAEPSDVILQRTNWQIQGYLS
EQADMIEKLGSSFPMSAFESVLKLLQKVAPELHRVHFLRYLNSLYHDDYPAALENLHRYF
DYSAGMEGSDFVPTSFGCTSFGRYEIALLSLGMAHFHFGHPKLALEVLTEAVRVCQQHSD
DTCLAYTLTAICNLLSEVGISNMTGIMGTSDSQMTSIGTSLSVQQQLFVLLRRSLKRADS
LKLKRLVASNHLAMAKFDLTHVQRPLLSFGPKASIQLRTCPTNVCKKLRLSSQLIHQFDN
ESSVMTIDGALSTSWLKNQRKPTTSLVFPPESGSESNCDTFYSWLQSSSVPGSVLQLVGS
SYLVRVTSWELYGSASLARSNSLLFATCFADSSSSADLALAYGKLIQHLAVYKGYKEAFV
ALKIAEAKFLSISKSGILPVKLQLLHERALHRGHLKLAQQICDELGVLASSVAGVDMELK
TEASLRCARTLLAANQFSQAASVAHSLFCKCYKFNLHVENATVLLLLAEIHKRSGNAVLG
IPYALASLSFCQSFNLDLLRASATLTLAELWLLLGSRHAKRALNLIHGAFPIILGQGGLE
LQSRAYIAEAKCYLSDMSISVSEDPDIVLDSLRQACEGLDALEYHELAAEAYYLMAVVLD
TSGQIEQRDEAASRFKQHIIVLENPVKPEDPLLNLL
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggctgggattttgaagccacaaagtgggtttgtaattactccccacaaagtatcgatc
tgcatacttctgcaggtctatgctccttctggtcaatattctgtgccattcccttttgcc
tcggtttctcagcataatcgtcttggattgttcttgattgcacttacaaagtcatgtgat
gatattttggagccaacattggatgaattcctgaagctactgaaggaatttggtggatta
ttagataattggttaagtgatcatgtaaccggtaggttatcatcattatcatcaccagat
gacctctttacctttttcagtgagttacgagttgcatgtcctatacactttatggaattt
aatgtaactgtgtcaggcatccttgcgggtcctgaaacaagcattgttgacgacgaccaa
ataaatttggatccaaatagcaaccttggaatgtatcttcgtcgttgcttgcttgccttc
aatattctgtcatttgagggcatgtgccatcttttgacaaatataaagacatattgtaaa
gaagccttctcatgtcctccatatgaaatgtctcatttggatgatcctactaatgatcta
gaggcaccagtagaatatgaaaacatggatttggagaactttgtacttcaaaactttaca
gaagaacttgaatcaagaaaaaggtccactgaaagggtcccttttcataatcattcatca
aaagcactgtctagtttaatcgaagatattatggtttcaccaggccaaaaaggcaaacac
aatcacaggagtgcagaaagtagccaatatatgagctcccccacctctgcattaccaaat
gctgaaccttctgatgtgattcttcaacggacaaactggcagatacaaggatacttgtca
gagcaagcagacatgattgaaaagcttggaagctcctttcctatgagtgcatttgaatct
gttttaaagcttcttcagaaagtggccccagagttgcatcgtgttcactttttgcgttat
ctgaatagcctttatcacgatgattacccagctgccttggagaatcttcatcgttatttt
gattatagtgcagggatggagggatctgattttgttcccacatcatttggctgcaccagc
ttcggaagatatgaaattgcattactatctttgggaatggcacattttcattttggtcac
cctaagttagctctggaggttttaactgaagcagtccgtgtctgtcagcagcacagtgat
gatacttgtcttgcctacacattaacagccatttgtaacctgttatctgaagttggtatc
tcgaacatgactggaattatgggaacatcagattcgcagatgaccagtatcggcacatca
ttgtctgttcagcaacagttgtttgtgcttcttagaagatctctaaaaagagcagattct
ttaaaattaaagcggttggtagcttccaatcatttagcaatggctaagtttgatttaacg
catgttcagagacctttgctatcctttgggcccaaagcttccattcagctcagaacttgt
ccaactaatgtttgcaagaaacttagattaagttctcaattgatccaccaatttgacaat
gaaagctcggtaatgacaattgatggtgctttgagtacttcatggctaaagaatcagagg
aaaccgacaacttcattggtttttcctccagaaagtggatctgagagcaattgtgacacg
ttttattcatggttacaatcaagttctgttcctggatctgtactgcaactcgtaggttct
tcctacctagttcgtgtgacatcttgggagctatatggaagtgcttctcttgctcgatca
aattctctgctttttgcgacctgctttgctgactcttcaagttcagccgaccttgcattg
gcatatgggaagctcatccaacatttggctgtgtacaaagggtacaaagaagcctttgta
gcccttaagatagcagaagcaaagtttttgtccatttcaaagtctggtatcttgccagtt
aagctgcagctgcttcatgagcgggctttacataggggacatttgaaactagctcaacaa
atatgtgatgaacttggagtattggcttcttctgtagctggtgtagacatggagctcaag
actgaagcaagtcttcgttgtgctcggacattgcttgccgctaatcagtttagtcaggca
gcttctgtagcacattctctcttctgcaaatgttacaaatttaatctgcatgtggagaat
gcgactgttctactcttgcttgctgaaatccacaagagatctgggaatgctgttttagga
attccctatgctttggcaagcctatccttttgccaatcatttaacttggatcttctcaga
gcctcggctactttaacactagccgaattgtggctcttgcttggatcaaggcatgcaaaa
agggctttgaaccttattcatggtgcctttccaattatacttggtcagggtggtctcgag
cttcaatctcgggcctatattgcagaggcaaaatgttacttatcagacatgagtatttca
gtttctgaagatcctgatattgttcttgattcgttgagacaagcttgtgaaggacttgat
gctttggagtaccatgaattggcagcagaagcatattacttgatggctgttgtgcttgac
acgtctgggcaaatagaacaaagagatgaagctgcatctcgtttcaagcaacacattatc
gtgcttgaaaatcccgtaaagccagaagaccctcttcttaacctgttgtag
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