Cynara cardunculus var. scolymus (artichoke): 112518194
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Entry
112518194 CDS
T05604
Name
(RefSeq) 26S proteasome regulatory subunit 4 homolog A
KO
K03062
26S proteasome regulatory subunit T2
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
112518194
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ccav03051
]
112518194
Proteasome [BR:
ccav03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
112518194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_22
DUF815
nSTAND3
AAA_16
AAA_5
AAA_2
RuvB_N
AAA_lid_PRS2_C
ATPase
TIP49
RNA_helicase
AAA_3
AAA_24
NPHP3_N
AAA_28
NB-ARC
Sigma54_activat
TsaE
DUF1128
Mg_chelatase
AAA_7
IstB_IS21
Parvo_NS1
NACHT
AAA_25
ABC_tran
Motif
Other DBs
NCBI-GeneID:
112518194
NCBI-ProteinID:
XP_024981577
LinkDB
All DBs
Position
LG 9:complement(15915011..15920380)
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AA seq
445 aa
AA seq
DB search
MGQGTPGGLNRQGNSGDRKNDGDKKEKKFEPAAPPARVGRKQRKQKGPEAAARLPTVTPH
SKCRLRLLKLERIKDYLLMEEEFVANQERLKPQEEKTEEDRSKVDDLRGSPMSVGNLEEL
IDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDDVDPMVSVMK
VEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLL
AKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRY
DAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNKIESLDPALLRPGRIDRKIEFPL
PDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVT
HGDFKKAKDKVMFKKKEGVPEGLYM
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgggtcagggaactcccggcggtttgaaccggcaaggaaattcaggcgatcggaagaac
gatggggacaaaaaggagaagaaattcgaaccggcagcgccgcctgctcgagtcggccgg
aaacaacggaagcagaagggaccggaggcagccgctcggttaccgacggtgacgccgcat
tcgaagtgtaggctacggctcttaaagctagagcgaatcaaagattatctgttaatggaa
gaggagttcgtggccaatcaggagaggctaaagcctcaggaagagaaaactgaagaggat
aggtctaaggttgatgatctacgtggatctccgatgagtgttggtaatctggaggagctt
attgatgagaatcacgccattgtatcgtcgtcggttggaccggagtattatgttgggatt
ttatcatttgttgacaaggatcaattggagcctgggtgtgcgatcttgatgcacaataag
gttctgtctgttgttgggctccttcaggatgatgttgatcccatggtgtctgtcatgaag
gttgagaaggctcctttggaatcatatgctgatattggtggattagatgcccagatacaa
gaaataaaggaggcagtagaactcccgttgactcatcctgaactatacgaggacattggg
atcaaacctcctaagggggttatattgtatggagaacctggaacaggcaagaccttgctt
gccaaggcagtggcaaactctacatccgcaactttcttgcgtgttgttggaagtgagttg
attcaaaagtaccttggagatggtcctaaattggttagagagctcttcagagttgcggat
gacctctctccttctattgtcttcattgatgaaattgatgccgttggtacaaagaggtat
gacgcccactctggtggtgaacgtgaaattcagagaaccatgttggaattattgaaccag
ttagatggttttgattcaagaggtgatgtgaaagtgatcttggcgacaaacaaaatagaa
agtcttgacccggccttgctccggcctggtcgtattgataggaagatagagtttccgctt
cctgacatcaaaaccaggagacggattttccagatacacacatcaagaatgactttggct
gatgatgtcaacttggaagaatttgtgatgaccaaagatgagttctctggggccgacatc
aaggctatatgtaccgaggccggattacttgctttaagagaacgccgaatgaaggtgaca
catggtgactttaaaaaggcaaaggacaaggttatgttcaagaagaaagagggtgtacca
gaaggactttatatgtga
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