Cynara cardunculus var. scolymus (artichoke): 112518202
Help
Entry
112518202 CDS
T05604
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1
KO
K13103
tuftelin-interacting protein 11
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccav03041
]
112518202
Spliceosome [BR:
ccav03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
112518202
Other components
Complex C specific factors
112518202
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Anthrax_toxA
Motif
Other DBs
NCBI-GeneID:
112518202
NCBI-ProteinID:
XP_024981585
LinkDB
All DBs
Position
LG_9
Genome browser
AA seq
854 aa
AA seq
DB search
MEEDQEMERFGMENDYEDGQWIGDEFCYGKRKEKRHQSKDDVLYGIFASGDTDSDSEGGS
GKKRRKDFSRKQDLTKPLNFVSSGVVMPSEEIDQNPKEENKKDDQDGGNRPGLGSGAAAS
GLGLGFHSKDVSTAKEEDGENNIDFLPTTFGKMIKEGALQRREKEMEKSRLNKKSSQIGL
RRRDAKDDGNVGVFEKHTKGIGMKLLEKMGYKGGGLGRNAQGIVAPIEAKLRPKNMGMGF
NDYKEAANVPALMEPSEEKKALPQPAGIQTKEKLWSKQSRSKKKKKDYVTAEQLLVKKQE
QGLDVVQKVFDMRGPQVRVLTNLENLNAEEKSRENDIPMPELQHNINLIVDLAELDIQKI
DRDLRNERETVVTLQKEKEKLKDDAFRQKKQLDNMEEIVSMLERLGNESQLGTLTLDSLA
NSFRDLYKRFPDEYILCSLSSIACSLAMPLFIRVFQGWDPLQNPAHGLNVMLLWKDLLQG
EEIFDSTYTQLFMEVVFPAIRISGTNTWQARDPEPLLRFLDSWEQLLPHSALQTILENIV
MPKLAVAVDSWDPRRETIPIHSWVHPWLPLLGQKLESLYHTIRNRLESVLHAWHPSDMSA
YYILSPWKTVFDPASWEQIMVRHIIPKLLAVMHEFQVNPADQKLDQFYWVRTWATAIPIH
HMLHIMDVFFNKWQEVLYQWLCSKPNFQEVTNWYLGWKDLIPAELLSNEHIRYRLNMGLD
MMNQAAEGLEVVQPGLRENISYLKALEHRQFEAQKAAAAAQAAKGQQRSFGDDAGGGDMS
LKEVIEVHAQHNNLLFKPKVGRMQDGHQVYGFGNISIIVDSLNQKVFAQTEDRWSLVTLD
QLVKLEKSSVLRRR
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaccaggaaatggagaggtttgggatggaaaacgactatgaagatggtcaa
tggataggtgatgaattttgttatggaaagcggaaggaaaaacgtcatcagagcaaagat
gatgtgctctatggtatctttgcttctggtgacaccgacagtgactctgaaggtggctcc
ggcaagaagcggaggaaagatttttccagaaaacaggatcttaccaagccactcaatttt
gtatctagtggtgttgtgatgccaagcgaagagatagatcagaaccctaaagaggagaat
aagaaagacgatcaagatggtggtaaccggcctggtttaggttctggggcagctgcctct
ggtctagggctcggtttccattcaaaggacgtaagcacggctaaagaagaagacggagaa
aataatattgacttccttcctactacatttggtaagatgatcaaagaaggcgcacttcag
aggagggagaaggaaatggagaaatcccggttgaacaaaaagtcgtctcaaataggatta
agaaggagagatgcaaaagatgacggaaatgtgggcgtattcgagaagcataccaaggga
attgggatgaagctgcttgagaagatgggttacaaaggaggtggcttagggaggaatgca
caaggtattgttgctcctattgaagcaaagttgcggcccaagaacatgggaatgggattc
aatgactacaaagaggcagctaatgtgccagcattaatggaaccatcggaggagaaaaag
gccttgccgcagcctgctggtatccaaacaaaagagaagctgtggtcgaaacagagtcgc
tcaaaaaagaagaaaaaggattatgtaactgcagagcagttgctagtcaagaagcaagaa
caggggctggatgtagttcagaaagtgtttgatatgaggggcccacaagttcgggtgttg
acgaatcttgagaatttgaatgccgaagaaaaatcaagggagaacgatatccccatgccc
gagctccaacataatataaatttgatcgttgatttggccgagctcgatatacagaaaatc
gatcgggacttgagaaacgaaagggagacagttgtcactctgcaaaaagagaaggagaag
cttaaagatgatgcttttcgtcaaaaaaagcagctcgataatatggaggagatcgttagc
atgctggaacggctaggtaatgagagccagttgggaaccttgaccctagactcgctcgct
aactcatttcgggacttgtacaaacggtttcctgatgagtacatactctgcagcctttct
agcatcgcatgctctctcgccatgcctttgttcattcgagtttttcaaggatgggaccca
cttcaaaatccggcacatggtttgaatgttatgttactatggaaagacctgttgcaagga
gaagagatatttgattcgacttacacccaactcttcatggaagttgtgtttcctgctata
aggatatcgggtaccaacacttggcaagccagggaccctgaaccgttgctgcggtttctc
gattcttgggaacaactactgcctcactctgctcttcaaaccatactcgagaacattgtc
atgccaaagttagctgttgcagtcgactcatgggacccacgacgcgaaaccatccctata
cattcatgggtgcacccatggctaccattattgggccagaagctcgagagtctatatcac
actatacgtaaccggcttgaaagcgttcttcatgcttggcatccaagtgatatgtcggct
tactacatattgtcaccatggaaaactgtttttgatccggcaagctgggaacaaataatg
gttcgacacataattcctaaattgttggcggtcatgcatgaatttcaagtcaatccagcc
gatcaaaagcttgaccagttctattgggtccggacttgggctacagccattccgattcat
catatgcttcacataatggatgtattctttaacaaatggcaagaagtcttgtatcaatgg
ctatgttcaaaaccgaacttccaagaagtgacaaattggtatctgggttggaaggatctt
attccggccgagcttctatccaatgaacacatccggtatcggctcaatatgggtctagac
atgatgaaccaagcggctgaagggttggaggtggtccagcccggtctgagagaaaacatt
agctacctgaaggcacttgaacatcggcagtttgaagctcagaaggcggcagcagcagca
caggcggcaaagggacagcaacggagttttggtgatgatgcgggtggcggtgatatgagt
ttgaaggaagttattgaagttcatgcacaacataacaatttgctattcaagccaaaagtg
ggaagaatgcaagatggtcatcaagtttatgggtttgggaatattagtattattgtggac
tctttgaaccagaaggtatttgctcaaactgaagatagatggtctcttgtgacacttgac
caattggtgaagctagagaagagctctgttcttagaagaagatga
DBGET
integrated database retrieval system
