Cynara cardunculus var. scolymus (artichoke): 112518225
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Entry
112518225 CDS
T05604
Name
(RefSeq) probable sarcosine oxidase
KO
K00306
sarcosine oxidase / L-pipecolate oxidase [EC:
1.5.3.1
1.5.3.7
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00260
Glycine, serine and threonine metabolism
ccav00310
Lysine degradation
ccav01100
Metabolic pathways
ccav04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
112518225
00310 Lysine degradation
112518225
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
112518225
Enzymes [BR:
ccav01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
112518225
1.5.3.7 L-pipecolate oxidase
112518225
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Gene cluster
GFIT
Motif
Pfam:
DAO
GIDA
FAD_oxidored
NAD_binding_8
FAD_binding_2
Pyr_redox_2
HI0933_like
Amino_oxidase
3HCDH_N
Thi4
FAD_binding_3
Pyr_redox
Motif
Other DBs
NCBI-GeneID:
112518225
NCBI-ProteinID:
XP_024981612
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Position
LG 9:13831010..13832385
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AA seq
416 aa
AA seq
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MEDLDQFDVIVIGAGVMGSSTAYQAAKTGKRTLLIEQFDFLHYRGSSHGESRTIRATYPE
SYYCRMAMESEKLWMDAESEIGYKVYFKSQQLDLGPANNSSLMALISNCEEHSINHQILD
RHQTEKHFSGRIELPDDWIAVVTDLGGVLKPTKSVAMFQTLAIKHGAVLKDRTEIVEIVS
DEDRGGVLVSSRSGEVYSGKKCVVTAGAWVSKLVQKVSNGGIILPIQPLETTVFHWKIKK
GHELDYTIGAGFPSFASYGEPYIYGTPALEFPDLIKVAVHGGRECEPDKRTWGVDAEETM
IGHLKEWIKGRFGDRVNWEDGPVMIQSCLYSMTPDEDYIIDFLGGGFDEDVVVAGGFSGH
GFKMAPLVGKILVDLAVGGKVAAEKYEAEIKHLKLGRFEGNPKGNKKGFEDQVRLK
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggaagatttggaccaatttgatgtgattgtgatcggagccggtgtgatggggagttcg
acggcatatcaagcggcgaaaaccggtaaaagaactcttctcatcgagcaatttgatttc
ctacactaccgtggatcgtctcacggcgaatctcgaaccatccgagcaacttatcctgaa
tcatactactgtcggatggccatggaatcggagaaattgtggatggatgcagaatcagaa
atcggttataaggtttacttcaaatcacagcaattggatttgggaccggcgaataacagt
tctctcatggcgcttatcagcaattgcgaagagcactcgattaatcaccaaattctcgat
cgtcaccaaacagaaaaacatttttccggcaggattgagttgccagacgattggattgct
gttgtgacggatctcggaggtgtcctgaaacctactaaatcggttgccatgtttcaaaca
ctcgcaatcaaacatggagcagtgcttaaagacagaacggagatcgtagaaatagttagc
gatgaagatagaggtggcgttttggtgagtagccggtccggagaagtgtattccggtaag
aaatgtgtggtcaccgccggagcttgggtgagtaaactggtccaaaaggttagcaatggc
ggcatcattttacctatacagccattggaaacaaccgtatttcactggaagatcaaaaag
ggtcatgagcttgattacaccattggagcaggatttccatcgtttgcaagctacggtgag
ccatacatctatggaacaccagctttagagtttccagatctgatcaaagttgctgttcat
ggtggccgagaatgcgaaccagataaacggacatggggagtagatgcagaagagacaatg
attggacatctgaaagaatggatcaaaggacggtttggcgatcgagtcaattgggaagat
ggaccagttatgattcaatcatgtttgtattccatgacaccagatgaggattacattatt
gatttcttgggtggagggtttgatgaggatgtggtggtcgccggtgggttttccggccat
gggttcaagatggcgcccttagttgggaagatactggttgatctggccgtcggcgggaag
gtggctgccgagaaatatgaggcagaaatcaagcatttgaagctgggaagatttgaaggc
aatcccaaaggaaataagaaaggctttgaagaccaagttcgccttaagtag
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