Cynara cardunculus var. scolymus (artichoke): 112518314
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Entry
112518314 CDS
T05604
Name
(RefSeq) myosin-6-like
KO
K10357
myosin V
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
112518314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccav03019
]
112518314
04131 Membrane trafficking [BR:
ccav04131
]
112518314
03029 Mitochondrial biogenesis [BR:
ccav03029
]
112518314
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccav04812
]
112518314
Messenger RNA biogenesis [BR:
ccav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
112518314
mRNA cycle factors
P-body specific factors
112518314
Membrane trafficking [BR:
ccav04131
]
Others
Actin-binding proteins
Myosins
112518314
Mitochondrial biogenesis [BR:
ccav03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
112518314
Cytoskeleton proteins [BR:
ccav04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
112518314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
Hpr_kinase_C
TSC22
AAA_22
AAA_18
Motif
Other DBs
NCBI-GeneID:
112518314
NCBI-ProteinID:
XP_024981732
LinkDB
All DBs
Position
LG 9:15738685..15760476
Genome browser
AA seq
1504 aa
AA seq
DB search
MAASVSVGVGSLVWVEDPVEAWIDGKVVEATGADIKVVSTSGKTVVAKASNVYPKDAEAP
PCGVDDMTKLAYLHEPGVLSNLRSRYDINEIYTYTGSILIAVNPFTRLPHLYDSHMMAQY
KGAGFGELSPHPFAVADAAYRVMMNEGISQSILVSGESGAGKTESTKQLMRYLAYMGGRA
ASEGRSVEQKVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQKGRISGAAIRTYLLE
RSRVCQLSHPERNYHCFYMLCAAPPEDRQRFKLGDPRTFHYLNQSNCYQIDGLDEAKEYI
ATRNAMDVVGINSEEQDAIFRVVAAILHLGNIEFAKGKEIDSSVPKDEKSLFHLRTAAEL
FMCDVKALEDCLCKRVIVTRDETITKWLDPESAAVSRDALAKIAYSRLFDWLVDKINSSI
GQDSRSKYIIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIN
WSYIEFIDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFSQKLYQTFKNHKRFAKPKL
ARSDFTICHYAGDVTYQTELFLDKNKDYVIAEHQALLSASKCFFVSNLFPTSSEESSKSS
KFSSIGTRFKQQLQQLLETLSSTEPHYIRCVKPNNLLKPAIFENHNVLQQLRCGGVLEAI
RISCAGYPTRKAFDDFVDRFGILAPEVLDGSTDEIAACKRLLEKIGLEGYQIGKTKVFLR
AGQMAELDARRTEVLGRSASIIQRKVRSYMAQKSYMLLRRSVLQIQSVCRGQLARQVFES
MRIEASCLRIQRELRMYLARKAYREVCFSAVAIQTGLRGMAARNELRVRRQTKAAIIIQR
HCRKFLSHLQFAKLKKAAIVTQCAWRGKVARSELRKLKMAARETGALQAAKNKLEKQVEE
LTWRLQLEKRIRADLEEAKTQENGKLQSALQEMEVQFKETKELLMKERDTAKKEIEKIPL
IQEVPVVDHELMDKLTAENQKLKALIGSLEKKIGDTKKKYEESNKLSEERLKQALEAETK
IIQLKTAMQSLQEKVSDMASENQILRQQVFSSPGKRAPEDPHTPDTNPNVQNGLHGNEEP
QTPARNLVAESDGKPKRPPIDRQHENVDALIECVMKDTGFSQGKPVAAFTIYKCLLHWKS
FEAERTSVFDRLIQMIGSAIENQDNNEHMAYWLSNTSTLLFLIQRSLKPDGASSVRKPPP
PTSIFGRMTMGFRSSSSSVSLAAAAAALEVVRQVEAKYPALLFKQQLTAYVEKMYGIIRD
SLKKELGSLLTLCIQAPRTSKGVLRSGRSFGKDSQSSHWQAIVECLGTLLSTLKENFVPP
IIVQKIFTQIFSYINVQLFNSLLLRRECCTFSNGEYVKSGLAELEVWCGQAKEEYAGSAW
DELKHIRQAVGFLVIHQKYMISYDDITNDLCPILSVQQLYRICTLYWDDNYNTRSVSQDV
ISSMRILMTEDSNNAVSNSFLLDDNSSIPFSVDDLSTSLKVNDFADVKPAAELVQNPAFL
FLLV
NT seq
4515 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctctgtcagtgtaggggtcggatcacttgtctgggtggaggatccagttgag
gcttggatagatgggaaagttgttgaggcaactggtgcagacattaaggttgtttctact
tcagggaaaacggttgttgccaaggcatcaaatgtatatccgaaagatgctgaagcacca
ccatgtggagtggatgatatgacgaaattggcttatttgcatgaaccaggagttttaagt
aacttacgatcgagatatgatattaatgagatatatacttatacagggagcatattgata
gctgtaaaccctttcacaagattaccacatttgtacgatagccatatgatggcacagtat
aaaggggcaggatttggggaattgagtccccatccttttgctgttgcagatgctgcatac
agagttatgatgaacgaaggtataagtcagtctatacttgttagtggagagagtggagct
ggtaagactgaaagtacaaaacagctgatgcgatatcttgcttacatgggaggtagagct
gcttcagagggaagaagtgtcgaacagaaggtcctggagtccaatcctgtcttagaagct
tttggtaatgcgaaaactgtgagaaacaataactcaagtcgttttggcaagtttgtggag
attcagtttgatcagaagggaaggatttcaggggctgctattagaacgtacttactggaa
agatctcgtgtttgtcaactatcacatcccgaaaggaattatcattgcttctacatgctt
tgtgctgcaccaccagaggatcgtcaaagattcaaattgggagatccaaggacattccat
tatttgaatcaatcaaactgctaccagattgatggtttagacgaagcaaaagaatatatt
gctacaagaaatgcaatggatgttgtaggaattaattccgaggagcaggatgcaattttt
agagttgtggctgcaattcttcatctggggaacatagaatttgcaaaaggaaaggaaata
gattcatctgttcccaaagatgaaaaatctttgttccacctaaggactgctgccgagttg
ttcatgtgtgatgtgaaagctctagaggattgtctatgcaaacgtgtaattgtaacacgt
gatgagaccatcaccaaatggttggatccagaatctgctgctgtcagcagagatgcttta
gcaaaaatcgcatactcgaggttatttgactggctcgtagataagatcaatagttcaatt
ggtcaggactcacgctcaaaatacataattggagtactagacatatacggatttgagagt
ttcaagacaaacagctttgagcagttctgcatcaacttgacgaatgaaaaactccagcag
catttcaatcagcatgtctttaaaatggagcaagaagaatatacaaaagaagaaattaat
tggagctacatcgaatttattgataatcaagatatcctggatctcattgagaagaaaccg
ggtggcattatagctctcctagacgaggcttgtatgtttcctaggtcaacacatgaaaca
ttctcgcaaaagctgtaccaaacttttaagaaccacaagcggtttgctaaaccaaaattg
gcgcgttccgacttcacgatttgtcattatgctggtgatgtcacatatcaaactgagctg
ttcttggacaaaaacaaagattatgtcattgctgaacatcaggctctattaagcgcttcc
aaatgtttctttgtctcaaatttgttcccaacttcttctgaggagtcctctaagtcatca
aagttctcctcaattggcacacgatttaagcaacagctgcaacaattgcttgaaacattg
agctcaactgagcctcattatattcgttgtgtaaagcccaacaatcttctcaagcctgct
atttttgaaaatcataatgttctacagcaactccgatgtgggggagtcttggaggcaatc
aggattagttgtgctgggtatcccactagaaaagcatttgatgattttgtggatcggttt
ggcatcctggctcctgaagttttggatggcagcacggatgaaattgctgcttgcaagagg
cttctggagaaaattggacttgagggttatcagattggtaagacaaaggtgtttctaagg
gctggtcagatggctgagctggatgctcggcggactgaggtcttaggaaggtcagctagt
attattcaaaggaaagtccgttcttatatggcccaaaaaagttatatgttgttgcgccgg
tctgttttgcaaattcaatctgtctgccgaggacaacttgctcgacaagtttttgagagc
atgcgcatagaagcgtcttgtctgcggattcagagggagctgcggatgtatcttgctagg
aaggcttacagggaagtatgcttctccgctgttgctatccaaacaggtttacggggaatg
gctgcacgtaatgagcttcgggttagaaggcagacaaaagcagcaatcatcattcagaga
cattgtcgcaagttcttatcccacttgcagtttgcaaagttaaagaaagctgcaattgtt
acgcaatgtgcatggaggggaaaagtcgctcgtagtgaacttcggaagcttaagatggct
gcaagagaaaccggtgctttgcaagcggcaaaaaataaactagagaagcaagtggaagaa
ctgacttggcgactgcagcttgagaagcgcataagggctgacttggaagaagccaaaaca
caagaaaatggaaaactacaatctgctttgcaagagatggaagttcaatttaaagagact
aaagaactgcttatgaaggaacgtgacactgccaaaaaggaaattgaaaaaatcccactc
attcaggaggtcccagttgttgaccatgaactcatggataagcttactgctgaaaatcag
aaactcaaagctttaattggctctttagagaagaaaataggtgataccaagaaaaaatat
gaagagagtaacaaactcagtgaggagaggttgaagcaagctttagaggcagagacaaag
attattcagttaaagactgctatgcagagtcttcaagaaaaggtttctgacatggcatct
gagaaccagattcttcgacagcaagtgttttcttcacctggtaaacgtgcgccggaagat
ccacatactccagacactaatccaaatgtgcaaaatggtcttcatggaaatgaggagccc
caaacacctgctaggaatttggtggctgaatctgatggcaagcctaagagaccaccaatt
gatcgtcaacatgagaatgtagatgccctcattgaatgtgttatgaaagacactggattc
agtcaaggcaaacctgttgcagcatttaccatatacaaatgccttctccattggaaatct
tttgaagctgaaagaactagtgtgtttgataggcttattcagatgattggttcagcaatc
gagaatcaagataataatgagcatatggcatattggttatcaaatacgtctactttgttg
ttcttaatccaaagaagtctaaaacctgatggtgcaagttcagttcggaaaccaccacct
ccaacctcgatatttggaagaatgacaatgggatttcgctcatcctcgtcttctgtcagc
cttgctgcggctgcagctgcacttgaggttgttcggcaggttgaagccaaatacccagct
ttgcttttcaagcagcaactaacagcatacgtggagaaaatgtatggcattattcgtgac
agcttgaagaaggaattggggtcattacttaccttgtgtattcaggctccacgaacatcc
aagggagtgctaagatctggacggtccttcggcaaagattctcagtccagtcattggcaa
gccattgttgaatgtcttggcactcttctcagcacattgaaagaaaattttgtgcctccc
ataattgttcagaagatatttactcaaattttctcatatatcaatgtgcagctctttaac
agtcttcttctgcgccgggagtgttgtaccttcagcaatggggaatatgtgaaatctggg
ttagcagagttggaggtatggtgtggtcaggcaaaagaagagtatgcaggctcagcttgg
gatgaacttaagcatattagacaggctgttgggtttttggttatacatcagaagtacatg
atatcatatgatgacatcaccaacgatctatgcccaattctaagtgtccagcagttatat
agaatatgcactctttattgggatgacaactacaacactcgaagtgtatcccaagacgtt
atttcaagcatgaggatacttatgacagaggactcgaacaatgctgtcagcaattccttt
cttctagacgataattccagcatacctttctctgttgatgacctctctacttcccttaaa
gtaaacgattttgcagacgtaaaacctgctgcagaactcgtccaaaatcccgcctttctc
tttttactcgtatag
DBGET
integrated database retrieval system
